ID A0A151NTD4_ALLMI Unreviewed; 527 AA.
AC A0A151NTD4;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Heat shock factor protein 5 {ECO:0000313|EMBL:KYO40137.1};
GN Name=HSF5 {ECO:0000313|EMBL:KYO40137.1};
GN ORFNames=Y1Q_0013320 {ECO:0000313|EMBL:KYO40137.1};
OS Alligator mississippiensis (American alligator).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC Alligator.
OX NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO40137.1};
RN [1] {ECO:0000313|EMBL:KYO40137.1, ECO:0000313|Proteomes:UP000050525}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO40137.1};
RX PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA Ray D.A.;
RT "Sequencing three crocodilian genomes to illuminate the evolution of
RT archosaurs and amniotes.";
RL Genome Biol. 13:415-415(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the HSF family. {ECO:0000256|ARBA:ARBA00006403,
CC ECO:0000256|RuleBase:RU004020}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KYO40137.1}.
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DR EMBL; AKHW03002077; KYO40137.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151NTD4; -.
DR STRING; 8496.A0A151NTD4; -.
DR eggNOG; KOG1508; Eukaryota.
DR Proteomes; UP000050525; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR000232; HSF_DNA-bd.
DR InterPro; IPR027725; HSF_fam.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR10015:SF278; HEAT SHOCK FACTOR PROTEIN 5; 1.
DR PANTHER; PTHR10015; HEAT SHOCK TRANSCRIPTION FACTOR; 1.
DR Pfam; PF00447; HSF_DNA-bind; 1.
DR SMART; SM00415; HSF; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000050525};
KW Stress response {ECO:0000313|EMBL:KYO40137.1}.
FT DOMAIN 11..138
FT /note="HSF-type DNA-binding"
FT /evidence="ECO:0000259|SMART:SM00415"
FT REGION 100..122
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 328..362
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 328..360
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 527 AA; 57438 MW; 0CEAE584A70671F7 CRC64;
MEEPLLAAPI NPNNFPAKLW RLVNSPRFRS IRWDARGEGL LIDQPLFEAE LLGAGPGAGP
GGDGTAACAE LFKTTNFTSF IRQLNLYGFR KVVLGPPGGS PLAPPASASG SPAGPLHHFH
SPHFRRDRPD LLVHLKRLTS ANKAKLAAGL EVTSRPPNRF QRLLSTSLQG DALLPAPAPG
KADKPGQLTI GQFHRSFRRD SLSPYSYQGP QAMVTSSQKY SSYTPSPQYS QAYYPTAVLQ
CCSPTTHIDP LSGCASPTAS TYTHCNYFQT PPMQSSYPVE FLPSNWPCNM SDENKKTEVN
LEAVFQIVDE MHSSPKLEMV KVEPVENQCS MPQPNKGQRL LATPENSDVP SSNQASELEP
LTPVGSDITS FVVGTDQAMA CSLPQSPEFI YTIHATESLE TAATQMVQEP AATQEAHAKL
KEQLSHASTQ SSVVFVRESL PFNLQQVDSS IKCQTNTSET VVSSEQIGFL ISEVGPVNKS
AKDTVSSMQA KCRERRSSSQ KGKSPDLHLL VDVACKQEHF SEEELRE
//