ID A0A151QNY4_CAJCA Unreviewed; 571 AA.
AC A0A151QNY4;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Transposon Ty3-G Gag-Pol polyprotein {ECO:0000313|EMBL:KYP31996.1};
GN ORFNames=KK1_047430 {ECO:0000313|EMBL:KYP31996.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP31996.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP31996.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; KQ485515; KYP31996.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151QNY4; -.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR24559:SF437; RIBONUCLEASE H; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243}.
FT DOMAIN 46..225
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 304..433
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
SQ SEQUENCE 571 AA; 64601 MW; D8AA93E1B5933ECD CRC64;
MPGIDPSFIC HRLAIYREAK PVSQKQRKIG GERIEAVKVE TQKLLNAGFI KEIKYTTWLA
NVVMVKKSNG KWCMCVDYTD LNKACPKDAY PLPGIDRLVD EASGYAMLSF LDAYSSYNQI
LMYPPDEEYT AFITEQANYC YHIMPFRLKN AGATYQRLMD TVFVEQIGHN LEVYIDDMVI
KTKSATDHVR DLEEILQQLR KYNMRLNPEK CDFGVQGEKF LGFMITCQGI EANPDKCQAL
INMRSPQNHK EVQRLAGRLA SLSRFIPKMA ELSEYGIKYE SRGALKAQCL ADFIAELTPS
IPLEEQSWIL HVDGSSNTKG SGAGIILEGP NDMMLELAIK FDFQATNNQE EYEALLAGLR
LAKDVGVKKL RCCSDSKLIT QQVGGSYQTK EPHLQRYNLM VSHLTSSFDH FQIEHVPRAQ
NVRADLLSKL ASTKRLGQHK TIIQETISTP SYDSVAILAN NPSQSTWMSN IWEYLTDGTL
PSDKIEASKV RAKSCHFTIE AGELFKRGFS VPLLKCLDPD QAEYVMSEIH RGICGMHSRA
RSMAARVIRA GYYWPTMRSD CKAYVQKCEA C
//
