ID A0A151QS40_CAJCA Unreviewed; 679 AA.
AC A0A151QS40;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Retrovirus-related Pol polyprotein from transposon 297 family {ECO:0000313|EMBL:KYP33127.1};
GN ORFNames=KK1_046051 {ECO:0000313|EMBL:KYP33127.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP33127.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP33127.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; KQ484980; KYP33127.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151QS40; -.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR24559:SF437; RIBONUCLEASE H; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243}.
FT DOMAIN 46..225
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 443..572
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
SQ SEQUENCE 679 AA; 76919 MW; 43E48E153E433F28 CRC64;
MPSIDPNFHC HHLSVCRDAK PIARKKGKMG GERAQAIKEE TAKLLQARFI REVKYSTWLA
NVVMVKKANG KWRMCTDYTD LNKACPKDAY PLPHIDALVD GAAGHHRLSF LDAYSGYNQI
PMYSPDEEKT AFITDSANFC YKVMPFGLRN AGATYQRLMD KIFCHQIGTC MEVYVDDMVI
KSTSVGDHLK DLSTIFEEVR RHRMRLNPAK CTFGVAGGKF LGFMLSKRGI EANPDKCQAI
INMQSPRNIK EVQRLAGRIA SLACFLPCMA EKSRPIMYLL KKATKFQWNE ECETAFQNFK
TTLMAPPLLS KPDPCLDMII YISVSDKAIS TVLVQEKTEQ MPVYFISRVL QDAETRYQHL
EKTVLALVHT ARRLRHYFQS HRVLVRTDSP VTKVLRRPEL AGRMVAWSIE LSQFDIRFEP
RGPIKAQSLA DFLNEFTPQE IPESHLWTLH VDGSSNHQGS GAGIILEGPG QVVIEQSLRF
GFKASNNQAE YEALLAGLRL EKDLGIPKVQ CWSDSKVVTE QVNGTFQIKE PTLLLYFHAF
NKLKADFEDV QIKHTPRELN MRADQLARLA SSKKVSHLRS MIQQELPKPS ITQAECLQIQ
KETPNWMTGI IEYLTAGLLP IDPLEAKKMK VVAARYTLIA GELYKRGFSS PLLKCLAPDQ
AHYVIREIHE GICGTHSRS
//
