ID A0A151QVW6_CAJCA Unreviewed; 639 AA.
AC A0A151QVW6;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Copia protein {ECO:0000313|EMBL:KYP34389.1};
GN ORFNames=KK1_044655 {ECO:0000313|EMBL:KYP34389.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP34389.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP34389.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KQ484609; KYP34389.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151QVW6; -.
DR STRING; 3821.A0A151QVW6; -.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR InterPro; IPR029472; Copia-like_N.
DR InterPro; IPR025724; GAG-pre-integrase_dom.
DR PANTHER; PTHR37610; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37610:SF105; COPIA-LIKE POLYPROTEIN_RETROTRANSPOSON; 1.
DR Pfam; PF13976; gag_pre-integrs; 1.
DR Pfam; PF14244; Retrotran_gag_3; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000075243}.
FT DOMAIN 29..76
FT /note="Retrotransposon Copia-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF14244"
FT DOMAIN 506..556
FT /note="GAG-pre-integrase"
FT /evidence="ECO:0000259|Pfam:PF13976"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 258..277
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 316..337
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 13..30
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 316..334
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 639 AA; 73060 MW; 6BD8279E2343753A CRC64;
MAEEESSLKQ TNIKKGDESQ NPNSPYYLHP GENINTLTVS PVLDGPNYHS WSKLMKRGLQ
SRNKYKFVDG TIKEPPANDS LHDVWIRCNT MVISWITRSV SLQIAQSIVY IDNAEDLWKD
LRDRFSKGDH FRMSDLLQEI HSIKQGERTI STYHIDLKIL WEELEILRPI PACSCTVKCT
CELVKTVRNY KETEYVICFL KGLNDSYNTV RSQVLMMDPL PNINKVFSLV LQQERQVLGN
LLQEVNLVAS ITNNKQSFGG RNGSSSGRGR GRFNQRNFSN QPQKICTFCG KERHTVETCY
FKHGFPPNFN FKNKRQTSTV NSYPSDSAPS PTTVEGSDHK IIGKEYTEVS CTITTKQYNQ
LMEILKGSNV SGETHVVDNL QQHPGNILST QKEQKLPDNV WILDSGATDH VSNSLSCYDS
YNTIEPIRIK LPNGFITQTQ ISGTVAFSGR FFLQDVLYIP DFNYNIISVG KIVKNFNCKI
VFDKLCCYIQ DHNNKLMIGP ANLQCNLYIL QRQNFSENKI VNSARTSSDN NMNNSNFDLW
HYRLGHPSDS VLQQIKGQFP YVNLGHPSDS ILQQIKGQFP YVKYDHKLVC DYCHLAKQCK
LSFPISINST ASCFYLMHMD IWVPLSICSI HGHKYFHNL
//
