ID A0A151S309_CAJCA Unreviewed; 806 AA.
AC A0A151S309;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:KYP49137.1};
GN ORFNames=KK1_029169 {ECO:0000313|EMBL:KYP49137.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP49137.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP49137.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; KQ483483; KYP49137.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151S309; -.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd09272; RNase_HI_RT_Ty1; 1.
DR InterPro; IPR029472; Copia-like_N.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR013103; RVT_2.
DR PANTHER; PTHR45895; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED; 1.
DR PANTHER; PTHR45895:SF169; LCR-LIKE PROTEIN; 1.
DR Pfam; PF14244; Retrotran_gag_3; 1.
DR Pfam; PF07727; RVT_2; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 769..795
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1..40
FT /note="Retrotransposon Copia-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF14244"
FT DOMAIN 289..431
FT /note="Reverse transcriptase Ty1/copia-type"
FT /evidence="ECO:0000259|Pfam:PF07727"
FT REGION 179..205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 806 AA; 91167 MW; F0AE81AB0F3A0801 CRC64;
MALVSPLLTV KNYHNWSMGM KRSLISKNKF KFVNGSLPMP HAFDPSFNAW ERCNNLTLRS
PHQVLYGEVP DISHLRIFGC LCYSSTLSLN RSKFDPRAHK CVFVGYRSGT KGYLVYNLNT
KQLQVSRHVI FEELVFPYLL NATKSTNFSP PQCITCPNSQ FLTQPNVVLE PIVLQPAPQC
QPNEEQIPSH SDSAHSPSSS PVPLRRSIRH KQRPAYLKDY NCHTTSQQAN QGTSYPIHSF
VSFAQLSPAH AVYSASISDC KEPNSFSEAN KLECWKRAME AEISALENNG TWTLVHLPPG
IISIGNKWVY KIKTRSDGTI ERYKARLVAK GYTQIEGLDY LDTFSPVAKL TTIRVVLALA
AMQNWHIHQL DVNNAFLHGD LREDIYMTIP QGMVVSGTNR VCKLSKSLYR LKQASRQWFE
KLSTFLLSLE FVSIKKNLHT VFGIKDLGIL KYFLGLEIAH SSVGISISQR KYCLELLTDA
SMLDCKPANT PLDPSVHLHQ DTGQLYDDAA SYRRLVGRLL YLTATRPDIT FATQQVSQFM
NSLTQAHYKA ANRILRYLKK APGLGLFFLR KSHIQVKGFS DADWGGCLDT RRSISGYCFF
IGDALVNWRS KKQTTVARSS AEAEYRALAA ATCELQWLHF LLQDLHTPLS KSHVLFCDNQ
SALHITQNPV FHERTKHLEL DCHIVREKLQ SGLMHLLPLP SKDQLADFFT KALLPRLFQS
FLSKLGVLNI FSLSACGGYY SHLHNWLSHL SLATNLPAVP ASCPYSDYSF LYCISVIFIL
HSIFFSFLFS AAIYMQSIVS FQFAMN
//
