ID A0A151SA34_CAJCA Unreviewed; 929 AA.
AC A0A151SA34;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Retrovirus-related Pol polyprotein from transposon 17.6 {ECO:0000313|EMBL:KYP51676.1};
GN ORFNames=KK1_026444 {ECO:0000313|EMBL:KYP51676.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP51676.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP51676.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; KQ483434; KYP51676.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151SA34; -.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00303; retropepsin_like; 1.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.10.20.370; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR005162; Retrotrans_gag_dom.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR35046:SF9; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR35046; ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF03732; Retrotrans_gag; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50878; RT_POL; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 163..179
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 445..624
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT REGION 193..231
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KYP51676.1"
SQ SEQUENCE 929 AA; 108024 MW; 08A99C210241996D CRC64;
LPYFHGKDDV EGYLDWEIKV EQIFACHQVS EERKVSLATL SFQSHAMYWW TSLVRDRQLH
NDPPIQYWNE LRSALRRRHI PSYYTIELMN KLQRLQQRHI SVEEYRQVME LYMMRARIRE
EENRRAKFFK RNLLLSHSRK RKRKRKRKNK NVITSSSKSS DIKCFKCLGR GHIAFQCPNK
KIMILRGQDI YSSHDESSST TTSDSESSDE DHQIENAYPY DGSQPSESHA SQRENIFHTR
CNILDKACSL IVDSGSCCNC CSTRLVEKLN LTPIPHPKTY QLHWLNEDGD IIVDKQVKTM
HNGLTNEITF THKEKKFVLH PLSPSKHTSM KKKKEENIIP LEGLQQEISK QILLVEKPSY
VLLYRSVLQC HNLNLEPSSL PLGITQLLKE FDDVFPSEGP KGLPPFRGIE HQINFVPKAS
LPNRPAYRTN PQETKETENQ VQELLDKGWV QKSLSPCVVP VLLVPKKDGK WRMCCDCRAI
NNITIKYRHP IPILDDILDE LHGANIFSKI DLKSGYHQIR IKEGDEWKTA FKTKFGLYEW
LVMPFGLTNA PSTFMRLMNH VLRECIGKFM VVYFDDILIY SRSQDDHLGH LREVLLILRQ
NHLFANFEKC TFCVDHMVFL GFIVNKEGVR VDPEKIKAIQ KWPKPKNVSK VRIFHGLASF
YRRFVPNFST IASPLNELVK KDVPFEWTNK HDKAFQLLKH QLTNTPILAL PNFDKTFELE
CDASGIGIGA VLLQGGHPIA YFSEKLKGAS LNYPTYDKKL YALVRALQTW ERYLVSKEFV
IHSDHELLKY LRGQSKLNKR HAKWLEFLEQ FSYIIKFKKG KANVVADALS RRHTLLVSLG
TQILGFNNIK ELNEKDLNFG DIYAKCQQKA FNGFYMAEGC LYKEGKLCIP QGSIRKLLIK
ESHEGGLMGH FGVDKTLKLL KEIFFWPHM
//
