ID A0A151SER8_CAJCA Unreviewed; 568 AA.
AC A0A151SER8;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Retrovirus-related Pol polyprotein from transposon opus {ECO:0000313|EMBL:KYP53330.1};
GN ORFNames=KK1_024707 {ECO:0000313|EMBL:KYP53330.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP53330.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP53330.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; KQ483414; KYP53330.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151SER8; -.
DR OMA; HEAICGS; -.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 6.10.20.110; -; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR47266; ENDONUCLEASE-RELATED; 1.
DR PANTHER; PTHR47266:SF28; GYPSY RETROTRANSPOSON INTEGRASE-LIKE PROTEIN 1; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243}.
FT DOMAIN 36..103
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|Pfam:PF00078"
FT DOMAIN 147..233
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
FT DOMAIN 321..377
FT /note="Integrase zinc-binding"
FT /evidence="ECO:0000259|Pfam:PF17921"
SQ SEQUENCE 568 AA; 63991 MW; CE543ED86A6EAC23 CRC64;
MVKKPNGKWR MCTNYTSLNK ACLKDAYPLP NIDQLRLMNK ILSDQIGQSM EVYVDDMVVK
LRDVSAHEGD LADVFQALRQ HRMRLNPEKC VFGVSGGKFL GFMLSNRGIE ANPDKCQAIL
DMKSLSSLKE VQKLTGCFED EPWTMHVDGS SNAQGSGAGV ILASPSGIIV EQSLRFGFRA
SNHQAEYEAL LAGMRLATEM GVKKVICWTD SKIVAEQVRH ILRINNEQAD QLARLASSRK
PGQLRTTIHL EISPSVTAEC MMTNIETPTW MTMIQNFIIH GNLPTDPMQA RKVRTQTARY
SVVDDELYRR GFSTPLLKCV NDQQADYVMR EIHEAICGSH SRARTLAAKL LRAGYYWPTL
KGDCAEFVKK CVQCQKHGNL IHASATELHI EHPQSNGPAE AANKVILTKL KKRLVLWAYR
CTPQSTTKET PFRLAYGADA MIPVEVGEPS FRRQHFNEES NDNSLRAELD VLDEVREKAQ
IVAEAFKQRM SPRFNSNLKP RTFHEGDLVW RATGSARCNS AEGKLLANWD GPFRVRHALH
NGAYKLEELS GKVLPRTWNS THLKMYCS
//
