ID A0A151TJM1_CAJCA Unreviewed; 1222 AA.
AC A0A151TJM1;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
GN ORFNames=KK1_013569 {ECO:0000313|EMBL:KYP67245.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP67245.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP67245.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; CM003608; KYP67245.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151TJM1; -.
DR STRING; 3821.A0A151TJM1; -.
DR OMA; FPFTILH; -.
DR Proteomes; UP000075243; Chromosome 6.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 3.10.450.40; -; 1.
DR Gene3D; 3.30.1490.180; RNA polymerase ii; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR000722; RNA_pol_asu.
DR InterPro; IPR006592; RNA_pol_N.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF36; DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1; 1.
DR Pfam; PF11523; DUF3223; 1.
DR Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR SMART; SM00663; RPOLA_N; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|EMBL:KYP67245.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 83..384
FT /note="RNA polymerase N-terminal"
FT /evidence="ECO:0000259|SMART:SM00663"
SQ SEQUENCE 1222 AA; 137220 MW; 51B79F1FD151E905 CRC64;
MKFRVSSNDL FRRTAIIVEA NDKASKKRTL GRGLPADYWD FIPYDAQQEE SYVNRRVLSP
GQVFSLLKDV DQNIIEKYIP RKNLLSLDCF PVTPNCHRVT EVPYAISNGN RLSFDDRTRS
CKKLVDFRGT TNELGSRVLD CLRISKFFPF AHDFSFEMQL NPDKTPTSIF ADIQQRKVAE
NAFNSSGLRW IKDVVLGKRN DSTFRTVVVG DPDLELSEIG IPCQIAESLQ VSEYVNRQNK
EKLLYCCELR LLEKGQINVS RKGSSVLLYK KEDLQVGDIF YRPLTDGDKV LINRPPSIHQ
HSMIALTVRV LPISSVVCIN PLCCSPLRGD FDGDCLHGYI PQSVSARVEL NELVALDRQL
INGQSGRNLL SLSQDSLTAA YLLMEDGVLL NVYQMQQLQM FCNKRLTPPA FVKAPSCNIL
CEWLSMTGFS VSLSDLYLSS DSYARKNMME EITYGIQDAE KACNFKQLFL ADKYGCKNNT
FLAMIKAGSK GNLVKLVQHS MCLGLQNSLV RLSYRLPRHL SCTAWNSLKG LDSLQLFSGT
LESVQSYIPY AVVESSFLTG LNPLECFVHS VTNRDSSFSD NADLPGTLTR RLMFFMRDLY
NAYDGTVRNL YGNQLVQFSY DIEEESSCDE SFQEYTIGGE PVGALSACAI SEAAYSALGQ
PVSLLETSPL LNLKNVLECG SRKKNGDQTV SLFLSEKLGK QRHGFEYAAL EVKNYLERLL
FSSIVSSVMI IFTPHDRSSL EKYSPWVCHF HLDKEIVTRR KLKVHSIIDS LYQRYYSLTK
ESKVYFTNLK ISSKKCSADS MAEEGEDNSI DKEGDDCITV TIVENSKNPI QLDSVRDSVL
PFLLGTAIKG FLDIKKVDIL WNNMSKATNS YHSSSGELYL RVTMSSEGNS GRFWGVLKIH
CHKITQIIDW TRSHPDNINH FSSAYGIDAG WQYFLNVLAS ATSDTGKSIL CKHLCLVANS
LSASGEFVGL NAKGMAKQRK HASVSSPFVQ ACFSNPGGCF IKAAKSGVMD NLQGSIDSFA
WGNCPSMGTS GLFDIVYSEK GHEVAKSADV YDLLEASFDK LNNKIGTHSL NYSSDKCGSE
FRHKDGYALK ETKQWKNVVR NFVTVNDIQK LTSASRCILN KYSIDDLLSE SDRSIMLRVL
HFHPRRSEKF GTGPQDIKVG RHPIFKDSRC FHIVRTDGTV EDFSYRKCIL GALEIVDPKK
SKIQKKKWSG DGDTHAISMH NK
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