GenomeNet

Database: UniProt
Entry: A0A158NWJ1_ATTCE
LinkDB: A0A158NWJ1_ATTCE
Original site: A0A158NWJ1_ATTCE 
ID   A0A158NWJ1_ATTCE        Unreviewed;       369 AA.
AC   A0A158NWJ1;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   24-JAN-2024, entry version 32.
DE   RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN   Name=105625168 {ECO:0000313|EnsemblMetazoa:XP_012061899.1};
OS   Atta cephalotes (Leafcutter ant).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC   Formicidae; Myrmicinae; Atta.
OX   NCBI_TaxID=12957 {ECO:0000313|EnsemblMetazoa:XP_012061899.1, ECO:0000313|Proteomes:UP000005205};
RN   [1] {ECO:0000313|Proteomes:UP000005205}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21347285; DOI=10.1371/journal.pgen.1002007;
RA   Suen G., Teiling C., Li L., Holt C., Abouheif E., Bornberg-Bauer E.,
RA   Bouffard P., Caldera E.J., Cash E., Cavanaugh A., Denas O., Elhaik E.,
RA   Fave M.J., Gadau J., Gibson J.D., Graur D., Grubbs K.J., Hagen D.E.,
RA   Harkins T.T., Helmkampf M., Hu H., Johnson B.R., Kim J., Marsh S.E.,
RA   Moeller J.A., Munoz-Torres M.C., Murphy M.C., Naughton M.C., Nigam S.,
RA   Overson R., Rajakumar R., Reese J.T., Scott J.J., Smith C.R., Tao S.,
RA   Tsutsui N.D., Viljakainen L., Wissler L., Yandell M.D., Zimmer F.,
RA   Taylor J., Slater S.C., Clifton S.W., Warren W.C., Elsik C.G., Smith C.D.,
RA   Weinstock G.M., Gerardo N.M., Currie C.R.;
RT   "The genome sequence of the leaf-cutter ant Atta cephalotes reveals
RT   insights into its obligate symbiotic lifestyle.";
RL   PLoS Genet. 7:e1002007-e1002007(2011).
RN   [2] {ECO:0000313|EnsemblMetazoa:XP_012061899.1}
RP   IDENTIFICATION.
RG   EnsemblMetazoa;
RL   Submitted (APR-2016) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the SF3B4 family.
CC       {ECO:0000256|ARBA:ARBA00008363}.
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DR   EMBL; ADTU01028080; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_012061899.1; XM_012206509.1.
DR   AlphaFoldDB; A0A158NWJ1; -.
DR   STRING; 12957.A0A158NWJ1; -.
DR   EnsemblMetazoa; XM_012206509.1; XP_012061899.1; LOC105625168.
DR   GeneID; 105625168; -.
DR   KEGG; acep:105625168; -.
DR   eggNOG; KOG0131; Eukaryota.
DR   InParanoid; A0A158NWJ1; -.
DR   OMA; AMVYEIM; -.
DR   OrthoDB; 21912at2759; -.
DR   Proteomes; UP000005205; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd12335; RRM2_SF3B4; 1.
DR   Gene3D; 3.30.70.330; -; 2.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   InterPro; IPR034159; SF3B4_RRM2.
DR   PANTHER; PTHR48030; SPLICING FACTOR 3B SUBUNIT 4; 1.
DR   PANTHER; PTHR48030:SF3; SPLICING FACTOR 3B SUBUNIT 4; 1.
DR   Pfam; PF00076; RRM_1; 2.
DR   SMART; SM00360; RRM; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS50102; RRM; 2.
PE   3: Inferred from homology;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005205};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW   ProRule:PRU00176}.
FT   DOMAIN          1..48
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          57..136
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   REGION          167..369
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        202..268
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        285..369
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   369 AA;  39525 MW;  BBB08ADDC3832C81 CRC64;
     MPKDRVTQMH QGYGFVEFMG EEDADYAIKI MNMIKLYGKP IRVNKASAHQ KNLDVGANIF
     IGNLDPEVDE KLLYDTFSAF GVILQTPKIM RDPETGNSKG FAFINFASFD ASDASIEAMN
     GQYLCNRPIS VSYAFKRDAK GERHGSAAER LLAAQNPLSQ ADRPHQLFAD APPLAPPSMP
     NSNANTHQPA HHPQHHVMHH GMVVPPPPPP STPGPPMGHP PPPPVPPPPS GGFPPANIPP
     PPLPPMSMAT HPPLPPGMPP PLPPMPVPTS QAQSAASRMM APPPPLWSVG TPPQGQFPPP
     PPPSSSGGPP QFGQYQPTPP RPPPPTWRHP PPPPVSQGGP PPPPPPQFRP PFPPRGPPPP
     PPPHDGNQY
//
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