ID A0A160FAS9_9BACI Unreviewed; 432 AA.
AC A0A160FAS9;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE SubName: Full=RNA polymerase sigma-54 factor {ECO:0000313|EMBL:ANB63997.1};
GN Name=rpoN {ECO:0000313|EMBL:ANB63997.1};
GN ORFNames=GFC29_2349 {ECO:0000313|EMBL:ANB63997.1};
OS Anoxybacillus sp. B7M1.
OC Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.
OX NCBI_TaxID=1490057 {ECO:0000313|EMBL:ANB63997.1, ECO:0000313|Proteomes:UP000076753};
RN [1] {ECO:0000313|EMBL:ANB63997.1, ECO:0000313|Proteomes:UP000076753}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=b7m1 {ECO:0000313|Proteomes:UP000076753};
RA Evans L.H., Alamgir A., Owens N., Weber N.D., Virtaneva K., Barbian K.,
RA Babar A., Rosenke K.;
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-54 factor family.
CC {ECO:0000256|ARBA:ARBA00008798}.
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DR EMBL; CP015436; ANB63997.1; -; Genomic_DNA.
DR RefSeq; WP_044741438.1; NZ_CP015436.1.
DR AlphaFoldDB; A0A160FAS9; -.
DR KEGG; anl:GFC29_2349; -.
DR PATRIC; fig|1490057.3.peg.2650; -.
DR OrthoDB; 9814402at2; -.
DR Proteomes; UP000076753; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.1330; RNA polymerase sigma-54 factor, core-binding domain; 1.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR InterPro; IPR038709; RpoN_core-bd_sf.
DR NCBIfam; TIGR02395; rpoN_sigma; 1.
DR PANTHER; PTHR32248; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR PANTHER; PTHR32248:SF4; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR Pfam; PF00309; Sigma54_AID; 1.
DR Pfam; PF04963; Sigma54_CBD; 1.
DR Pfam; PF04552; Sigma54_DBD; 1.
DR PIRSF; PIRSF000774; RpoN; 1.
DR PRINTS; PR00045; SIGMA54FCT.
DR PROSITE; PS00717; SIGMA54_1; 1.
DR PROSITE; PS00718; SIGMA54_2; 1.
DR PROSITE; PS50044; SIGMA54_3; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000076753};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 70..257
FT /note="RNA polymerase sigma factor 54 core-binding"
FT /evidence="ECO:0000259|Pfam:PF04963"
FT DOMAIN 272..431
FT /note="RNA polymerase sigma factor 54 DNA-binding"
FT /evidence="ECO:0000259|Pfam:PF04552"
SQ SEQUENCE 432 AA; 50349 MW; F59D175AC08ACBFB CRC64;
MRAGLFQEQR LHLSLTKELA QAIELLQYST LELRSFLHEQ SLENPFLEIK DHKFVRTPKQ
SRNGETRNWI ENIGKSSETL ASYLKAQLHA FPLSAKRRQI LHYLIASLDE DGYLRMEMKE
TAALLSLSEE ELEDAIQFLQ SLEPAGVGAR SLQECLLIQL QRLPVRHELA ERVIADYFTM
FVEKTWKALA KQLKISISNL QEIWDLIRTL EPRPGSHYAA ADPHFIVPDL IVTKRDGEIC
VWLNDEFLPE VIWNHAYEKK VADQQDEQIE WFVREKYRQF MWLTKSLEQR KQTLVLVVKE
IMERQKQCLE EGLAALRPLT MRDIADALNI HESTVSRVIR NKYVQTPFGT VELRHFFTNS
LSAENDNEEA SAAKTKELIK KLIEAEDKHA PLSDQKIADL LNEEHQIAIS RRTVAKYREQ
LHIPSSAKRK RY
//
