ID A0A161R4M3_9BRAD Unreviewed; 122 AA.
AC A0A161R4M3;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE RecName: Full=Small ribosomal subunit protein uS13 {ECO:0000256|ARBA:ARBA00035166, ECO:0000256|HAMAP-Rule:MF_01315};
GN Name=rpsM {ECO:0000256|HAMAP-Rule:MF_01315,
GN ECO:0000313|EMBL:NUU43633.1};
GN ORFNames=A4A58_24420 {ECO:0000313|EMBL:KZD24001.1}, HB776_11755
GN {ECO:0000313|EMBL:QND71825.1}, HP556_21150
GN {ECO:0000313|EMBL:NUU43633.1};
OS Tardiphaga robiniae.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Tardiphaga.
OX NCBI_TaxID=943830 {ECO:0000313|EMBL:KZD24001.1, ECO:0000313|Proteomes:UP000076574};
RN [1] {ECO:0000313|EMBL:KZD24001.1, ECO:0000313|Proteomes:UP000076574}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Vaf07 {ECO:0000313|EMBL:KZD24001.1,
RC ECO:0000313|Proteomes:UP000076574};
RA Kopat V., Chirak E., Kimeklis A., Andronov E.;
RT "Microsymbionts genomes from the relict species Vavilovia formosa (Stev.)
RT Fed.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000515291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=581 {ECO:0000313|Proteomes:UP000515291};
RX PubMed=32686981;
RA Safronova V., Guro P., Sazanova A., Kuznetsova I., Belimov A., Yakubov V.,
RA Chirak E., Afonin A., Gogolev Y., Andronov E., Tikhonovich I.;
RT "Rhizobial microsymbionts of the narrowly endemic Oxytropis species growing
RT in Kamchatka are characterized by significant genetic diversity and possess
RT a set of genes that are associated with T3SS and T6SS secretion systems and
RT can affect the development of symbiosis.";
RL Mol. Plant Microbe 33:1232-1241(2020).
RN [3] {ECO:0000313|EMBL:QND71825.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=581 {ECO:0000313|EMBL:QND71825.1};
RX PubMed=33272987;
RA Hatmaker E.A., Presle G., Cannon O., Guss A.M., Elkins J.G.;
RT "Complete genome sequences of four natural Pseudomonas isolates that
RT catabolize a wide range of aromatic compounds relevant to lignin
RT valorization.";
RL Mol. Plant Microbe Interact. 9:1232-1241(2020).
RN [4] {ECO:0000313|EMBL:NUU43633.1, ECO:0000313|Proteomes:UP000570860}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LMG 26467 {ECO:0000313|EMBL:NUU43633.1,
RC ECO:0000313|Proteomes:UP000570860};
RA Lemaire J.F., Inderbitzin P., Gregorio O.A., Collins S.B., Wespe N.,
RA Knight-Connoni V.;
RT "Genome Sequencing of Type Strains.";
RL Submitted (MAY-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Located at the top of the head of the 30S subunit, it
CC contacts several helices of the 16S rRNA. In the 70S ribosome it
CC contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit
CC (bridge B1b), connecting the 2 subunits; these bridges are implicated
CC in subunit movement. Contacts the tRNAs in the A and P-sites.
CC {ECO:0000256|HAMAP-Rule:MF_01315}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Forms a loose heterodimer
CC with protein S19. Forms two bridges to the 50S subunit in the 70S
CC ribosome. {ECO:0000256|HAMAP-Rule:MF_01315}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS13 family.
CC {ECO:0000256|ARBA:ARBA00008080, ECO:0000256|HAMAP-Rule:MF_01315,
CC ECO:0000256|RuleBase:RU003830}.
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DR EMBL; LVYV01000006; KZD24001.1; -; Genomic_DNA.
DR EMBL; JABMCJ010000091; NUU43633.1; -; Genomic_DNA.
DR EMBL; CP050292; QND71825.1; -; Genomic_DNA.
DR RefSeq; WP_068731455.1; NZ_LVYV01000006.1.
DR AlphaFoldDB; A0A161R4M3; -.
DR STRING; 943830.A4A58_24420; -.
DR KEGG; trb:HB776_11755; -.
DR OrthoDB; 9803610at2; -.
DR Proteomes; UP000076574; Unassembled WGS sequence.
DR Proteomes; UP000515291; Chromosome.
DR Proteomes; UP000570860; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.8.50; -; 1.
DR Gene3D; 4.10.910.10; 30s ribosomal protein s13, domain 2; 1.
DR HAMAP; MF_01315; Ribosomal_S13_S18; 1.
DR InterPro; IPR027437; Rbsml_uS13_C.
DR InterPro; IPR001892; Ribosomal_uS13.
DR InterPro; IPR010979; Ribosomal_uS13-like_H2TH.
DR InterPro; IPR019980; Ribosomal_uS13_bac-type.
DR InterPro; IPR018269; Ribosomal_uS13_CS.
DR NCBIfam; TIGR03631; uS13_bact; 1.
DR PANTHER; PTHR10871; 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18; 1.
DR PANTHER; PTHR10871:SF1; 37S RIBOSOMAL PROTEIN SWS2, MITOCHONDRIAL; 1.
DR Pfam; PF00416; Ribosomal_S13; 1.
DR PIRSF; PIRSF002134; Ribosomal_S13; 1.
DR SUPFAM; SSF46946; S13-like H2TH domain; 1.
DR PROSITE; PS00646; RIBOSOMAL_S13_1; 1.
DR PROSITE; PS50159; RIBOSOMAL_S13_2; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000076574};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01315};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01315};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW Rule:MF_01315};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|HAMAP-
KW Rule:MF_01315}; tRNA-binding {ECO:0000256|HAMAP-Rule:MF_01315}.
FT REGION 95..122
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 122 AA; 13862 MW; 379C831F359C479D CRC64;
MARIAGVNIP TNKRVLIALQ YIHGIGQKNA ADIIEKVKIT PERRVNQLSD AEVLQIREVI
DRDYLVEGDL RRETGMNIKR LMDLGCYRGL RHRRGLPVRG QRTHTNARTR KGPAKSIAGK
KK
//
