ID A0A161SQ68_9BRAD Unreviewed; 481 AA.
AC A0A161SQ68;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=DNA-binding protein {ECO:0000313|EMBL:KZD23052.1};
GN ORFNames=A4A58_06520 {ECO:0000313|EMBL:KZD23052.1};
OS Tardiphaga robiniae.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Tardiphaga.
OX NCBI_TaxID=943830 {ECO:0000313|EMBL:KZD23052.1, ECO:0000313|Proteomes:UP000076574};
RN [1] {ECO:0000313|EMBL:KZD23052.1, ECO:0000313|Proteomes:UP000076574}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Vaf07 {ECO:0000313|EMBL:KZD23052.1,
RC ECO:0000313|Proteomes:UP000076574};
RA Kopat V., Chirak E., Kimeklis A., Andronov E.;
RT "Microsymbionts genomes from the relict species Vavilovia formosa (Stev.)
RT Fed.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZD23052.1}.
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DR EMBL; LVYV01000012; KZD23052.1; -; Genomic_DNA.
DR RefSeq; WP_068733052.1; NZ_LVYV01000012.1.
DR AlphaFoldDB; A0A161SQ68; -.
DR STRING; 943830.A4A58_06520; -.
DR OrthoDB; 1123084at2; -.
DR Proteomes; UP000076574; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:KZD23052.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000076574};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 15..69
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 481 AA; 54292 MW; F376F2EF10D4A027 CRC64;
MAGESGKKLF VGPRFRRIRQ QQGLSQTQMA EGLGISPSYI NLIERNQRPV TAQLLLRLAE
TYDLDLRDLA TADEDRFFAE LNEIFSDPLF RQIDLPKQEL RDLAELCPGV THALQRLYAA
YTEARRGETM VAAQMADRHE GAPFEANPIE RVRDLIEANR NYFPELEAAA ESLRDEINVP
SQDLFAALST RLRDKYSIVT RIMPVDVMRE TLRRFDRHRR QLLISEMVDA PGRAFQVAFQ
IGLVECSSNF ESIIGRAGPL DDTTRRLYRI TLANYFAAAA LMPYAAFHSA AEALSYDVQV
LGQRFNVGFE QICHRLTTLQ RPNARGVPFF MLRVDNAGNV SKRFSSGTFP FSKFGGTCPL
WNVHSTFDTP DRLLSQVIEL PDGSRYFSIA QTLRRPAAPH PQPQPRFAIG LGCEIRHAGK
LAYSAGLDLE KTEGTPIGVN CRLCERENCS QRAEPPITRS LILDENTRRV SSFAFSNARE
L
//
