ID A0A161WQ11_9PEZI Unreviewed; 817 AA.
AC A0A161WQ11;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 22-FEB-2023, entry version 22.
DE SubName: Full=Transcription initiation factor IIF {ECO:0000313|EMBL:KZL73346.1};
DE Flags: Fragment;
GN ORFNames=CT0861_05108 {ECO:0000313|EMBL:KZL73346.1};
OS Colletotrichum tofieldiae.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum;
OC Colletotrichum spaethianum species complex.
OX NCBI_TaxID=708197 {ECO:0000313|EMBL:KZL73346.1, ECO:0000313|Proteomes:UP000076552};
RN [1] {ECO:0000313|EMBL:KZL73346.1, ECO:0000313|Proteomes:UP000076552}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=0861 {ECO:0000313|EMBL:KZL73346.1,
RC ECO:0000313|Proteomes:UP000076552};
RA Hacquard S., Kracher B., Hiruma K., Weinman A., Muench P., Garrido Oter R.,
RA Ver Loren van Themaat E., Dallerey J.-F., Damm U., Henrissat B.,
RA Lespinet O., Thon M., Kemen E., McHardy A.C., Schulze-Lefert P.,
RA O'Connell R.J.;
RT "Survival trade-offs in plant roots during colonization by closely related
RT pathogenic and mutualistic fungi.";
RL Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZL73346.1}.
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DR EMBL; LFIV01000045; KZL73346.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A161WQ11; -.
DR STRING; 708197.A0A161WQ11; -.
DR OrthoDB; 6611at2759; -.
DR Proteomes; UP000076552; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR CDD; cd07980; TFIIF_beta; 1.
DR Gene3D; 3.40.50.1000; HAD superfamily/HAD-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR036412; HAD-like_sf.
DR InterPro; IPR023214; HAD_sf.
DR InterPro; IPR040450; TFIIF_beta_HTH.
DR InterPro; IPR040504; TFIIF_beta_N.
DR InterPro; IPR011039; TFIIF_interaction.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR28181:SF1; COLD TOLERANCE PROTEIN 1; 1.
DR PANTHER; PTHR28181; UPF0655 PROTEIN YCR015C; 1.
DR Pfam; PF12710; HAD; 1.
DR Pfam; PF02270; TFIIF_beta; 1.
DR Pfam; PF17683; TFIIF_beta_N; 1.
DR SUPFAM; SSF56784; HAD-like; 1.
DR SUPFAM; SSF50916; Rap30/74 interaction domains; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Initiation factor {ECO:0000313|EMBL:KZL73346.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein biosynthesis {ECO:0000313|EMBL:KZL73346.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000076552};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 80..230
FT /note="TFIIF beta subunit N-terminal"
FT /evidence="ECO:0000259|Pfam:PF17683"
FT DOMAIN 299..362
FT /note="TFIIF beta subunit HTH"
FT /evidence="ECO:0000259|Pfam:PF02270"
FT REGION 364..383
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 791..817
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KZL73346.1"
SQ SEQUENCE 817 AA; 92842 MW; FA3DAEEF7AC2CA6C CRC64;
LQRNHRLYLN LTSRFWNTKG ASDRIRVLNM ADSTYIKSEP YIKPDPEAVT ASPLDDDDLY
EDAGDLEFFD QYSDQGSFGQ AYLARVPKDL WEAWDSLPDD AEIEVGTMRQ WDVVRPDGSV
EHRFKMLLNS DRAEHQLMPK EYDLEMGKEL ARSTFVFTEE DLPGFKAKSK ARTDAANAGI
PARFLRPKAD KVEKKPFEKG RRWQPYYRKA IPKKTKIAAR IQYELACKPV DNAESQAILQ
RKQVEAQRPK HTLQIMEQRA ANSIIHHGSA AAVEKFGSFI KTSAPTKATK PKKTENRAAR
MSEEQLLDGL MEAFRKYEYW KMSILKARFD QPEAFLRQTL EKIAVLNRSG IHANEWSLQE
HLKSMASGAT SETAPEEAAA EDDDEEVVME DVHDMSGSMC LRIQTNTRRA YTFKSALRLN
SVHTVAHMPR KTLNLVFDFD GTITTKDTIG TLAEIALRFQ YERGIDSSSA WRQILKDYSQ
DHADHVSTYK PTPDDRFSLI EELAYLRGLR EVELRSVRRV EQSGLFRDVR REDLAKAGKA
ARMEGRVNLR DGFAELMDVA KDNGWTVSVV SVNWSRSFIS GVLSDYSFDI VANEIEMDGS
ILGPGVLGPP TRETILTTCE DKLRALRALT TRQGAEDTEA LVYFGDSTSD IECLLETRGV
VVSPAPDSSL IKTLRRVGYE VPRVEEHHPS SGIVWASTFV ESSETMCFYR GTVYECKHSE
FGKKVSDCKD QRDFLAGNSK EKNACTKRQI HSMNRVRVDA KCRKCQRLDA LRTRTRKTFL
SLRENLEKRR APVGKSDKEA FNTGENLKGF MSSDDAL
//