ID A0A161ZXI9_DAUCS Unreviewed; 624 AA.
AC A0A161ZXI9;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=Splicing factor Cactin {ECO:0000256|ARBA:ARBA00034534};
GN ORFNames=DCAR_020795 {ECO:0000313|EMBL:KZM91840.1};
OS Daucus carota subsp. sativus (Carrot).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC Daucus; Daucus sect. Daucus.
OX NCBI_TaxID=79200 {ECO:0000313|EMBL:KZM91840.1};
RN [1] {ECO:0000313|EMBL:KZM91840.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaf {ECO:0000313|EMBL:KZM91840.1};
RX PubMed=27158781; DOI=10.1038/ng.3565;
RA Iorizzo M., Ellison S., Senalik D., Zeng P., Satapoomin P., Huang J.,
RA Bowman M., Iovene M., Sanseverino W., Cavagnaro P., Yildiz M.,
RA Macko-Podgorni A., Moranska E., Grzebelus E., Grzebelus D., Ashrafi H.,
RA Zheng Z., Cheng S., Spooner D., Van Deynze A., Simon P.;
RT "A high-quality carrot genome assembly provides new insights into
RT carotenoid accumulation and asterid genome evolution.";
RL Nat. Genet. 48:657-666(2016).
CC -!- SIMILARITY: Belongs to the CACTIN family.
CC {ECO:0000256|ARBA:ARBA00006895}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZM91840.1}.
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DR EMBL; LNRQ01000006; KZM91840.1; -; Genomic_DNA.
DR RefSeq; XP_017259177.1; XM_017403688.1.
DR AlphaFoldDB; A0A161ZXI9; -.
DR STRING; 79200.A0A161ZXI9; -.
DR EnsemblPlants; KZM91840; KZM91840; DCAR_020795.
DR GeneID; 108228174; -.
DR Gramene; KZM91840; KZM91840; DCAR_020795.
DR KEGG; dcr:108228174; -.
DR OMA; HIDFWND; -.
DR OrthoDB; 558574at2759; -.
DR Proteomes; UP000077755; Chromosome 6.
DR InterPro; IPR019134; Cactin_C.
DR InterPro; IPR018816; Cactin_central.
DR PANTHER; PTHR21737:SF4; CACTIN; 1.
DR PANTHER; PTHR21737; POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3; 1.
DR Pfam; PF10312; Cactin_mid; 1.
DR Pfam; PF09732; CactinC_cactus; 1.
DR SMART; SM01050; CactinC_cactus; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000077755}.
FT DOMAIN 146..343
FT /note="Splicing factor cactin central"
FT /evidence="ECO:0000259|Pfam:PF10312"
FT DOMAIN 500..624
FT /note="Splicing factor Cactin C-terminal"
FT /evidence="ECO:0000259|Pfam:PF09732"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 353..396
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 110..154
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 353..393
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 624 AA; 73638 MW; BE22CB8FE723BF6E CRC64;
MGSERSRHSR RRSRDSESSD DSEYERERDR KKKKKKITED DIAEYLAKKA QKKAMKVAKK
LKSQSVSGYA NESNPFGDSN LNEKFVWRKK IERDVTQGVP LEMFSVKEEK RKQRERMAEI
EKVKKRREER ALEKAQHEEE MALLARERAR AEFQDWEKKE EEFHFDQSKA RSEIRLREGR
IKPIDILSKH LDPSDDFDIE IDEPYLVFQG LTVKDMEELH EDIKMHLDLD RATPTHIQYW
EALLVVCDWE LAEARKKDAL DRARVRGEQP PAELLAEERG LHSSIEADVK NLLQGKTYSE
LEVLQAEIES QMRSGTAKVV EYWEAILKRL HIYKAKACLK EIHAKMLRKH LEHLEQPSGS
EENVEREDDT GRDHRSLTPQ EVDTVHDGKD DQPLSPEPIT YEEIEEAEEA GSYSPELLHG
EEAEEAIDPE EDKAMLERKR VAVLEEQQRR VQEALASRPV QSTEDNFELK AMKAMGEMEE
GDAVFGNNDE VNLDSQVYWW HDKYRPRKPK YFNRVHTGYE WNKYNQTHYD HDNPPPKIVQ
GYKFNIFYPD LVDKTKAPIY TIEKDGDSAE TCIIRFHAGP PYEDIAFRMV NKEWEYSHKK
GFKCTFERGI LHVYINFKRH RYRR
//
