ID   A0A162A4M1_DAUCS        Unreviewed;       774 AA.
AC   A0A162A4M1;
DT   06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT   06-JUL-2016, sequence version 1.
DT   27-MAR-2024, entry version 20.
DE   RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE            EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN   ORFNames=DCAR_019374 {ECO:0000313|EMBL:KZM96132.1};
OS   Daucus carota subsp. sativus (Carrot).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC   Daucus; Daucus sect. Daucus.
OX   NCBI_TaxID=79200 {ECO:0000313|EMBL:KZM96132.1};
RN   [1] {ECO:0000313|EMBL:KZM96132.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   TISSUE=Leaf {ECO:0000313|EMBL:KZM96132.1};
RX   PubMed=27158781; DOI=10.1038/ng.3565;
RA   Iorizzo M., Ellison S., Senalik D., Zeng P., Satapoomin P., Huang J.,
RA   Bowman M., Iovene M., Sanseverino W., Cavagnaro P., Yildiz M.,
RA   Macko-Podgorni A., Moranska E., Grzebelus E., Grzebelus D., Ashrafi H.,
RA   Zheng Z., Cheng S., Spooner D., Van Deynze A., Simon P.;
RT   "A high-quality carrot genome assembly provides new insights into
RT   carotenoid accumulation and asterid genome evolution.";
RL   Nat. Genet. 48:657-666(2016).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC         glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC         ChEBI:CHEBI:83408; EC=3.1.4.46;
CC         Evidence={ECO:0000256|ARBA:ARBA00029315};
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KZM96132.1}.
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DR   EMBL; LNRQ01000005; KZM96132.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A162A4M1; -.
DR   STRING; 79200.A0A162A4M1; -.
DR   EnsemblPlants; KZM96132; KZM96132; DCAR_019374.
DR   Gramene; KZM96132; KZM96132; DCAR_019374.
DR   OMA; GFDYWAD; -.
DR   Proteomes; UP000077755; Chromosome 5.
DR   GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR   GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR   CDD; cd08604; GDPD_SHV3_repeat_2; 1.
DR   Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 2.
DR   InterPro; IPR030395; GP_PDE_dom.
DR   InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR   PANTHER; PTHR43620:SF46; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL6-RELATED; 1.
DR   PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR   Pfam; PF03009; GDPD; 2.
DR   SUPFAM; SSF51695; PLC-like phosphodiesterases; 2.
DR   PROSITE; PS51704; GP_PDE; 2.
PE   4: Predicted;
KW   Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Reference proteome {ECO:0000313|Proteomes:UP000077755};
KW   Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT   SIGNAL          1..25
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           26..774
FT                   /note="glycerophosphodiester phosphodiesterase"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5007830879"
FT   DOMAIN          61..361
FT                   /note="GP-PDE"
FT                   /evidence="ECO:0000259|PROSITE:PS51704"
FT   DOMAIN          377..676
FT                   /note="GP-PDE"
FT                   /evidence="ECO:0000259|PROSITE:PS51704"
SQ   SEQUENCE   774 AA;  84013 MW;  09EAB3335BE8A37A CRC64;
     MQVPGIMSRQ LCFVSLLLLA GLAAARNNPN SGHHKHGPQD GHVHAPPSVN KKFLTLSGGP
     PVVVARGGYS GLFPDSSDQA YSFAPMTSLP DTIMYCNVQL TKDNLGVCTT DILIDLSTTA
     ALAYPKGDKT YNINGRDLHG WFAMDYMLDD LKNTTFYVQN VFSRSSAFDG MAQILTPDDL
     AEIAATGKNR MWLNFDNDMF YAQHKLDAAK YIQESGKLWT PSHISSSELD FLKSLSTKVD
     KTKTKLVFKF LGKEDVEPTS RQKYGQIDLA TLKPFVAGIV VPKDYIFPIT KDNYTDAPTT
     LVADAHRLGL EVYASGFSND MVASYNYSYD PVNEYLQFID NSQFSIDGVL TDFPSTASNS
     IACFSQSKNI TTKTTKGLVI SHNGASGDFP GCTDLAYQKA IDAGADIIDC NVQMSKDGIA
     FCSSNIDLTG TTTAVTSFMD RSSNIPEIQP TNGIFSFDLT WSEVESLKPT IEVPIKDGSL
     LRNPRNKNKG KFLTLDAFLE LAKTRKTGGV MIKIRNAAYL ASKKGLGVID AVNTALQKAG
     LDKETTQKVM IQSEDSSVLA AFKSIPTYER VLSIKEAVSD APPAVVEEIK KNANAVVIDR
     ESIVQTNSGF FTTTFTKVVE EMHAGNLSVY VSRIRNEYLF LSLDYLADPY LELATFASLK
     VDGLVTDYPA TATAYLRNPC SDVNNPATAI AISAISPGNL IKQVDQTALP PALPPSPVLD
     NEDVVDPPLP PVTKIKNNAA PAQAPKASGA TKRVGNFGIV STVITLFFGM VCFF
//