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Database: UniProt
Entry: A0A162AD21_DAUCS
LinkDB: A0A162AD21_DAUCS
Original site: A0A162AD21_DAUCS 
ID   A0A162AD21_DAUCS        Unreviewed;       768 AA.
AC   A0A162AD21;
DT   06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT   06-JUL-2016, sequence version 1.
DT   24-JAN-2024, entry version 19.
DE   RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE            EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN   ORFNames=DCAR_013206 {ECO:0000313|EMBL:KZM99432.1};
OS   Daucus carota subsp. sativus (Carrot).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC   Daucus; Daucus sect. Daucus.
OX   NCBI_TaxID=79200 {ECO:0000313|EMBL:KZM99432.1, ECO:0000313|Proteomes:UP000077755};
RN   [1] {ECO:0000313|EMBL:KZM99432.1, ECO:0000313|Proteomes:UP000077755}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. DH1 {ECO:0000313|Proteomes:UP000077755};
RC   TISSUE=Leaf {ECO:0000313|EMBL:KZM99432.1};
RX   PubMed=27158781; DOI=10.1038/ng.3565;
RA   Iorizzo M., Ellison S., Senalik D., Zeng P., Satapoomin P., Huang J.,
RA   Bowman M., Iovene M., Sanseverino W., Cavagnaro P., Yildiz M.,
RA   Macko-Podgorni A., Moranska E., Grzebelus E., Grzebelus D., Ashrafi H.,
RA   Zheng Z., Cheng S., Spooner D., Van Deynze A., Simon P.;
RT   "A high-quality carrot genome assembly provides new insights into
RT   carotenoid accumulation and asterid genome evolution.";
RL   Nat. Genet. 48:657-666(2016).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC         glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC         ChEBI:CHEBI:83408; EC=3.1.4.46;
CC         Evidence={ECO:0000256|ARBA:ARBA00029315};
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KZM99432.1}.
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DR   EMBL; LNRQ01000004; KZM99432.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A162AD21; -.
DR   STRING; 79200.A0A162AD21; -.
DR   EnsemblPlants; KZM99432; KZM99432; DCAR_013206.
DR   Gramene; KZM99432; KZM99432; DCAR_013206.
DR   OMA; CTNIANV; -.
DR   Proteomes; UP000077755; Chromosome 4.
DR   GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR   GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR   CDD; cd08603; GDPD_SHV3_repeat_1; 1.
DR   CDD; cd08604; GDPD_SHV3_repeat_2; 1.
DR   Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 2.
DR   InterPro; IPR030395; GP_PDE_dom.
DR   InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR   PANTHER; PTHR43620:SF32; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL1-RELATED; 1.
DR   PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR   Pfam; PF03009; GDPD; 2.
DR   SUPFAM; SSF51695; PLC-like phosphodiesterases; 2.
DR   PROSITE; PS51704; GP_PDE; 2.
PE   4: Predicted;
KW   Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Reference proteome {ECO:0000313|Proteomes:UP000077755};
KW   Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT   SIGNAL          1..17
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           18..768
FT                   /note="glycerophosphodiester phosphodiesterase"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5007831073"
FT   DOMAIN          55..355
FT                   /note="GP-PDE"
FT                   /evidence="ECO:0000259|PROSITE:PS51704"
FT   DOMAIN          371..670
FT                   /note="GP-PDE"
FT                   /evidence="ECO:0000259|PROSITE:PS51704"
FT   REGION          724..743
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        725..743
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   768 AA;  84611 MW;  090EB90E070DD756 CRC64;
     MWKLLISFLY LAAFAAAQTS TKKPSPWQTL KASRFCKNNG GTVFWFEIET AGDAPLVIAN
     GGFSGLFPHS SSIAYAFALQ TGLPNTILWC DVQLTSDGYG VCLPDLLLNN GSDTGDQFPN
     KKKTYLINGN RTTGWFSVDF TLSELSKVSL IQGVYSRTFQ FDQNLFPVMT IQEVVKQVKP
     PGLWLNIQHA AFFDQHKLNI RSFVLSTSRS SIVNYISSPE VNFLKSIVAR LKATPTKLVF
     RFLGKKDIEP STNQTYDSLL KNLTFIKTFA SGILVPKTYI WPVDPKLNLQ PSTSVVIDAH
     KEGLKIYASD FANDVPLAYD FSYDPVDEYL KFIDNDNFSV DGVLSDFPIT PSAAIDCYSH
     MDKNDSSPAK PLIITHEGAS GDYPGCTDLA YKKAITDGAD ILDCPVQMTK DGLPFCLGSI
     NLIDRTNAVQ AYSTLTMDIP ELNGAGIFSF NLTWKEIQDL KPQIFNPYAE EKLYRNQNNK
     NKGNLMLLSD FLGLAYNATS ISGVVISIEE ASFLAKQGLS VTDAVLDALS TNDYDNQTIK
     RVMIQSTNSA VLTKIKEKKN FEFVYEVDEV IRDALNSTML DIKKFADAVV IKKKSVFSRN
     NIGFLIGTTD VVPKLKAFKL PVYVKLFQNE FFPQAWDFFS DARVELNSFV VGADIDGVIT
     EFPRTANNYR RNRCLGLGTN TPPYMTPVEP GSLLTVVLPQ PPAQAPSPVL SDSNVLEPPL
     PSVAVAPTTA NTTTPALPPT NPRNGQSKLV LSVLVANLPL LLAAILSL
//
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