ID A0A162IUN4_9ACTN Unreviewed; 1150 AA.
AC A0A162IUN4;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Patatin-related protein {ECO:0000313|EMBL:OAA23004.1};
GN ORFNames=UG55_104110 {ECO:0000313|EMBL:OAA23004.1};
OS Frankia sp. EI5c.
OC Bacteria; Actinomycetota; Actinomycetes; Frankiales; Frankiaceae; Frankia.
OX NCBI_TaxID=683316 {ECO:0000313|EMBL:OAA23004.1, ECO:0000313|Proteomes:UP000077018};
RN [1] {ECO:0000313|EMBL:OAA23004.1, ECO:0000313|Proteomes:UP000077018}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EI5c {ECO:0000313|EMBL:OAA23004.1,
RC ECO:0000313|Proteomes:UP000077018};
RX PubMed=27389275;
RA D'Angelo T., Oshone R., Abebe-Akele F., Simpson S., Morris K., Thomas W.K.,
RA Tisa L.S.;
RT "Permanent Draft Genome Sequence for Frankia sp. Strain EI5c, a Single-
RT Spore Isolate of a Nitrogen-Fixing Actinobacterium, Isolated from the Root
RT Nodules of Elaeagnus angustifolia.";
RL Genome Announc. 4:e00660-16(2016).
RN [2] {ECO:0000313|EMBL:OAA23004.1, ECO:0000313|Proteomes:UP000077018}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EI5c {ECO:0000313|EMBL:OAA23004.1,
RC ECO:0000313|Proteomes:UP000077018};
RA Wen L., He K., Yang H.;
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAA23004.1}.
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DR EMBL; LRTK01000041; OAA23004.1; -; Genomic_DNA.
DR STRING; 683316.UG55_104110; -.
DR PATRIC; fig|683316.3.peg.4146; -.
DR Proteomes; UP000077018; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0016042; P:lipid catabolic process; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.1090.10; Cytosolic phospholipase A2 catalytic domain; 1.
DR InterPro; IPR016035; Acyl_Trfase/lysoPLipase.
DR InterPro; IPR024282; DUF3376.
DR InterPro; IPR019894; Patatin-related_protein.
DR InterPro; IPR002641; PNPLA_dom.
DR NCBIfam; TIGR03607; patatin-like protein; 1.
DR Pfam; PF11856; DUF3376; 1.
DR Pfam; PF01734; Patatin; 1.
DR SUPFAM; SSF52151; FabD/lysophospholipase-like; 1.
DR PROSITE; PS51635; PNPLA; 1.
PE 4: Predicted;
KW Lipid metabolism {ECO:0000256|ARBA:ARBA00023098};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000077018};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 1055..1075
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1082..1103
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1123..1144
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 36..302
FT /note="PNPLA"
FT /evidence="ECO:0000259|PROSITE:PS51635"
FT REGION 323..352
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 623..680
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 815..836
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 325..347
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 628..657
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 658..678
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1150 AA; 119727 MW; 32CE1F0B7DF07C1F CRC64;
MSAISGTSSL ATMTGVDARH ADESDEGATQ EVRLAVVMTG GASLAVWMGG VAREINLLTA
ARAHQADPAE AGARGWSAAD TAAADRWAAL LTTLDVEVSV DVLAGASAGG INAALLGYAN
VQDTDLGPLR ELWIGLGSLR ELMRRPEERA FPSLLRGDET LLPALRTALR GLERPAGATP
AESRSGAAPT IRPTSVFITT TILRGESTRW SDDLGGTVRD LDHRGLFVFG EDDLTDPEAA
ARLALAARAS AAFPGAFEPA YVPVRNSPDA DHPDMADHVN AAGDFYGSDG GILVNRPIGP
ALQEIFDRPA RGRQVRRVLA YVVPSPNPPE APEPAPAPAP APAPAPADRS LPSAVDTLLG
ALSAALNQSI STDLRRIRQH NAAVRGLRAS RRGLFRLAPA GRPRLADQDV YDTYREQTAE
RAADVVMEAF DRIVVDSVSA PAPTPVEAVP ADAPARLADA HGRTELRLAA IAAARAEFPE
RLPGPGDPGE LWRLGRPAVD AVKGILISMI NEGYLLTTDP EDRAALAALA RGVHAAVVAP
REQAGAQLLP LPSTPAXRGP FTIVRHTLRD LPGAPSDQIV AEAARRWLRG VGDAETSRTD
LTLAWSTLGS LIEXLHGLLE RLLDRSPTAP PAPSPLQPSA PSQPSAPSQP SSPSQPSLTP
PAASTVTATA TLLASPPRTH RSGLSLAARR AIAADTLRDF LGYLPRRRGP AAVALLDLHL
VTHTMSGGDV VDQRVELVQV SSDVRCDLDP ARPTAXDKLT GLTLGNFGAF AKSSWRANDW
MWGRLDGTAW LVRILLDPRR LVWLRDSAAD RSSRAAQASS ADGAGTAGGV GPAAXVGPAA
GVGPAAGVAS PESWLGGFLR ALSAVAAAPA TAAVLAELAW LDEPDAPVPA SLPETAAWVA
AGIQREIAAG ELVSVAAAVR ADIAGAGVDP APSREFLDAV EAGSEADRGR VDPAAAEAIL
RLCHVADERL TDRANRPILL SLATQALAVL TAWLTSRRLL PRPLRPLAAG ARAVTRLVHA
AVDNVTRRRH RTTISLGTLL LGTGLTGAFT QGGALGGLGL LVAVAGLLLV SLSSWRTLAG
GLAIVGVAGL AAVAGAGLIP AVGDRLFPWM RDDAVPYLAA HPWAWAAVFG LLVLPPLWSA
VELLRPRRRG
//
