ID A0A162J1M6_9MICO Unreviewed; 718 AA.
AC A0A162J1M6;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=ATP-dependent Clp protease ATP-binding subunit ClpB {ECO:0000313|EMBL:TCO37975.1};
DE SubName: Full=Chaperone protein ClpB {ECO:0000313|EMBL:KZX20877.1};
GN Name=clpB_1 {ECO:0000313|EMBL:KZX20877.1};
GN ORFNames=ACH61_01995 {ECO:0000313|EMBL:KZX20877.1}, EV639_103162
GN {ECO:0000313|EMBL:TCO37975.1};
OS Rathayibacter tanaceti.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Rathayibacter.
OX NCBI_TaxID=1671680 {ECO:0000313|EMBL:KZX20877.1, ECO:0000313|Proteomes:UP000076717};
RN [1] {ECO:0000313|EMBL:TCO37975.1, ECO:0000313|Proteomes:UP000295366}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VKM Ac-2596 {ECO:0000313|EMBL:TCO37975.1,
RC ECO:0000313|Proteomes:UP000295366};
RX PubMed=26203337; DOI=.1186/s40793-015-0017-x;
RA Whitman W.B., Woyke T., Klenk H.P., Zhou Y., Lilburn T.G., Beck B.J.,
RA De Vos P., Vandamme P., Eisen J.A., Garrity G., Hugenholtz P.,
RA Kyrpides N.C.;
RT "Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III:
RT the genomes of soil and plant-associated and newly described type
RT strains.";
RL Stand. Genomic Sci. 10:26-26(2015).
RN [2] {ECO:0000313|EMBL:KZX20877.1, ECO:0000313|Proteomes:UP000076717}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VKM Ac-2596 {ECO:0000313|EMBL:KZX20877.1,
RC ECO:0000313|Proteomes:UP000076717};
RA Vasilenko O.V., Starodumova I.P., Tarlachkov S.V., Dorofeeva L.V.,
RA Evtushenko L.I.;
RT "Draft Genome Sequence of Rathayibacter sp. Strain VKM Ac-2596 Isolated
RT from Leaf Gall Induced by Plant-Parasitic Nematodes.";
RL Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:TCO37975.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=VKM Ac-2596 {ECO:0000313|EMBL:TCO37975.1};
RA Whitman W., Huntemann M., Clum A., Pillay M., Palaniappan K., Varghese N.,
RA Mikhailova N., Stamatis D., Reddy T., Daum C., Shapiro N., Ivanova N.,
RA Kyrpides N., Woyke T.;
RL Submitted (MAR-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Homohexamer. The oligomerization is ATP-dependent.
CC {ECO:0000256|ARBA:ARBA00026057}.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZX20877.1}.
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DR EMBL; LIIN01000066; KZX20877.1; -; Genomic_DNA.
DR EMBL; SLWP01000003; TCO37975.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A162J1M6; -.
DR PATRIC; fig|1671680.3.peg.2125; -.
DR OrthoDB; 9803641at2; -.
DR Proteomes; UP000076717; Unassembled WGS sequence.
DR Proteomes; UP000295366; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Hydrolase {ECO:0000313|EMBL:TCO37975.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432}; Protease {ECO:0000313|EMBL:TCO37975.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000076717};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 52..197
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 452..620
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 619..710
FT /note="Clp ATPase C-terminal"
FT /evidence="ECO:0000259|SMART:SM01086"
FT COILED 266..346
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 718 AA; 79205 MW; 5F5C651390F5CB86 CRC64;
MQAGRMPQQD EKSALEQYGV NLTAIAASGK LDPVIGRDAE IRRVSQVLTR RTKNNPVLIG
EPGVGKTAVV EGLAQRIVAG DVAESLKGKQ LVSLDLSALI AGAKYRGEFE ERLKAVLQEI
EESEGRIITF IDELHTLMGA GGGEGSVAAA NMLKPMLARG ELRMIGATTL DEYRQYIEKD
AALERRFQQV LVGEPSVEDT VAILRGLKER YEAHHKVAIA DSALVAAASL SNRYITARQL
PDKAIDLIDE AASRLRMEID SAPVEIDELR RSVDRLKLEE LALKKEKDEA SKARLEKLRE
DLARRGSQLE ELQERWERER ASLNRVGELK NRLDALRIAA ERAQREGKLE RASKLLYGDI
PVIERELAAA EAEEEPAEGR MVNEQVTADD IAAVIAAWTG IPVGRLLQGE TEKLLHLETE
LHRRLIGQDE AVSAVSDAVR RTRAGISDPD RPTGSFLFLG PTGVGKTELA KALADHLFDD
EKAMVRIDMS EYGEKFAVSR LVGAPPGYIG YEQGGQLTEA VRRRPYSVVL LDEIEKAHPE
VFDVLLQVLD DGRLTDGQGR TVDFRNTILI LTSNLGSQYL VDPVLSRAQK EEAVQQMVRQ
AFKPEFVNRL DDIVIFDALD RTELGEIVSL YVDRLSKRLA ERRLDLAVTP AARGWLAERG
YDPQYGARPL RRLMQRAIDD QLATALLGGA IRDGDVVLVD VAEDGESLAV TAGLRAAP
//