ID A0A162QCI0_9CLOT Unreviewed; 374 AA.
AC A0A162QCI0;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=Tyrosine recombinase XerD {ECO:0000313|EMBL:KZL88385.1};
GN Name=xerD_10 {ECO:0000313|EMBL:KZL88385.1};
GN Synonyms=xerD_3 {ECO:0000313|EMBL:KZL93002.1}, xerD_6
GN {ECO:0000313|EMBL:KZL89354.1}, xerD_7 {ECO:0000313|EMBL:KZL88942.1};
GN ORFNames=CLMAG_28160 {ECO:0000313|EMBL:KZL93002.1}, CLMAG_52580
GN {ECO:0000313|EMBL:KZL89354.1}, CLMAG_58460
GN {ECO:0000313|EMBL:KZL88942.1}, CLMAG_63120
GN {ECO:0000313|EMBL:KZL88385.1};
OS Clostridium magnum DSM 2767.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1121326 {ECO:0000313|EMBL:KZL88385.1, ECO:0000313|Proteomes:UP000076603};
RN [1] {ECO:0000313|EMBL:KZL88385.1, ECO:0000313|Proteomes:UP000076603}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 2767 {ECO:0000313|EMBL:KZL88385.1,
RC ECO:0000313|Proteomes:UP000076603};
RA Poehlein A., Uhlig R., Fischer R., Bahl H., Daniel R.;
RT "Genome sequence of Clostridium magnum DSM 2767.";
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Site-specific tyrosine recombinase, which acts by catalyzing
CC the cutting and rejoining of the recombining DNA molecules.
CC {ECO:0000256|ARBA:ARBA00003283}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC {ECO:0000256|ARBA:ARBA00008857}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZL88385.1}.
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DR EMBL; LWAE01000020; KZL88385.1; -; Genomic_DNA.
DR EMBL; LWAE01000013; KZL88942.1; -; Genomic_DNA.
DR EMBL; LWAE01000009; KZL89354.1; -; Genomic_DNA.
DR EMBL; LWAE01000002; KZL93002.1; -; Genomic_DNA.
DR RefSeq; WP_066622934.1; NZ_LWAE01000020.1.
DR AlphaFoldDB; A0A162QCI0; -.
DR STRING; 1121326.CLMAG_28160; -.
DR PATRIC; fig|1121326.3.peg.2830; -.
DR OrthoDB; 9803188at2; -.
DR Proteomes; UP000076603; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR004107; Integrase_SAM-like_N.
DR Pfam; PF02899; Phage_int_SAM_1; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000076603}.
FT DOMAIN 21..119
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 169..358
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 374 AA; 44017 MW; 81F3F58E75C85AA2 CRC64;
MEVVKVKTEE KERYYVADND GLPIEPILKF IRFKDNTNYA RNTLRMYCQH LKLYFEYLEQ
RGLDFQKVTI DDLSLFVNWL QNPYKSLKVI PATPVDTARS PRTVNIIVDT VLLFYDYILR
HEEYSNDVSE RLKKFVTSSS RNFKGFLYEI AYDKKKVTSN ILKLKVPKSK PKTLSKDEIE
MLVRACSNLR DKFLLSLLYE TGMRIGETLS LWIEDIDISD MVIDLKDRGQ LENNAEIKTV
SSPRRIDISQ NLADMFMEYI AEYHNEEVET NHIFIKISGN NKNKAMHYVD VDNLFRSLKK
KTGIYVTPHM FRHSSLTVLR MAGWQPELLR VRAGHKNIYT TMNTYIHPSD EDITREFEKT
QPNLDLDIYN EGEE
//