ID A0A164AD08_9BRAD Unreviewed; 111 AA.
AC A0A164AD08;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=Integration host factor subunit alpha {ECO:0000256|ARBA:ARBA00018329, ECO:0000256|HAMAP-Rule:MF_00380};
DE Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};
GN Name=ihfA {ECO:0000256|HAMAP-Rule:MF_00380};
GN Synonyms=himA {ECO:0000256|HAMAP-Rule:MF_00380};
GN ORFNames=A4A58_22455 {ECO:0000313|EMBL:KZD24623.1}, HB776_06165
GN {ECO:0000313|EMBL:QND75322.1}, HP556_11915
GN {ECO:0000313|EMBL:NUU41818.1};
OS Tardiphaga robiniae.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Tardiphaga.
OX NCBI_TaxID=943830 {ECO:0000313|EMBL:KZD24623.1, ECO:0000313|Proteomes:UP000076574};
RN [1] {ECO:0000313|EMBL:KZD24623.1, ECO:0000313|Proteomes:UP000076574}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Vaf07 {ECO:0000313|EMBL:KZD24623.1,
RC ECO:0000313|Proteomes:UP000076574};
RA Kopat V., Chirak E., Kimeklis A., Andronov E.;
RT "Microsymbionts genomes from the relict species Vavilovia formosa (Stev.)
RT Fed.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000515291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=581 {ECO:0000313|Proteomes:UP000515291};
RX PubMed=32686981;
RA Safronova V., Guro P., Sazanova A., Kuznetsova I., Belimov A., Yakubov V.,
RA Chirak E., Afonin A., Gogolev Y., Andronov E., Tikhonovich I.;
RT "Rhizobial microsymbionts of the narrowly endemic Oxytropis species growing
RT in Kamchatka are characterized by significant genetic diversity and possess
RT a set of genes that are associated with T3SS and T6SS secretion systems and
RT can affect the development of symbiosis.";
RL Mol. Plant Microbe 33:1232-1241(2020).
RN [3] {ECO:0000313|EMBL:QND75322.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=581 {ECO:0000313|EMBL:QND75322.1};
RX PubMed=33272987;
RA Hatmaker E.A., Presle G., Cannon O., Guss A.M., Elkins J.G.;
RT "Complete genome sequences of four natural Pseudomonas isolates that
RT catabolize a wide range of aromatic compounds relevant to lignin
RT valorization.";
RL Mol. Plant Microbe Interact. 9:1232-1241(2020).
RN [4] {ECO:0000313|EMBL:NUU41818.1, ECO:0000313|Proteomes:UP000570860}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LMG 26467 {ECO:0000313|EMBL:NUU41818.1,
RC ECO:0000313|Proteomes:UP000570860};
RA Lemaire J.F., Inderbitzin P., Gregorio O.A., Collins S.B., Wespe N.,
RA Knight-Connoni V.;
RT "Genome Sequencing of Type Strains.";
RL Submitted (MAY-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: This protein is one of the two subunits of integration host
CC factor, a specific DNA-binding protein that functions in genetic
CC recombination as well as in transcriptional and translational control.
CC {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}.
CC -!- SUBUNIT: Heterodimer of an alpha and a beta chain. {ECO:0000256|HAMAP-
CC Rule:MF_00380, ECO:0000256|RuleBase:RU004485}.
CC -!- SIMILARITY: Belongs to the bacterial histone-like protein family.
CC {ECO:0000256|ARBA:ARBA00010529, ECO:0000256|HAMAP-Rule:MF_00380,
CC ECO:0000256|RuleBase:RU003939}.
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DR EMBL; LVYV01000003; KZD24623.1; -; Genomic_DNA.
DR EMBL; JABMCJ010000079; NUU41818.1; -; Genomic_DNA.
DR EMBL; CP050292; QND75322.1; -; Genomic_DNA.
DR RefSeq; WP_068730933.1; NZ_LVYV01000003.1.
DR AlphaFoldDB; A0A164AD08; -.
DR STRING; 943830.A4A58_22455; -.
DR KEGG; trb:HB776_06165; -.
DR OrthoDB; 9797747at2; -.
DR Proteomes; UP000076574; Unassembled WGS sequence.
DR Proteomes; UP000515291; Chromosome.
DR Proteomes; UP000570860; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0030527; F:structural constituent of chromatin; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-UniRule.
DR CDD; cd13835; IHF_A; 1.
DR Gene3D; 4.10.520.10; IHF-like DNA-binding proteins; 1.
DR HAMAP; MF_00380; IHF_alpha; 1.
DR InterPro; IPR000119; Hist_DNA-bd.
DR InterPro; IPR020816; Histone-like_DNA-bd_CS.
DR InterPro; IPR010992; IHF-like_DNA-bd_dom_sf.
DR InterPro; IPR005684; IHF_alpha.
DR NCBIfam; TIGR00987; himA; 1.
DR PANTHER; PTHR33175; DNA-BINDING PROTEIN HU; 1.
DR PANTHER; PTHR33175:SF2; INTEGRATION HOST FACTOR SUBUNIT ALPHA; 1.
DR Pfam; PF00216; Bac_DNA_binding; 1.
DR PRINTS; PR01727; DNABINDINGHU.
DR SMART; SM00411; BHL; 1.
DR SUPFAM; SSF47729; IHF-like DNA-binding proteins; 1.
DR PROSITE; PS00045; HISTONE_LIKE; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172, ECO:0000256|HAMAP-
KW Rule:MF_00380};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|HAMAP-
KW Rule:MF_00380}; Reference proteome {ECO:0000313|Proteomes:UP000076574};
KW Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW Rule:MF_00380};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015, ECO:0000256|HAMAP-
KW Rule:MF_00380};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845, ECO:0000256|HAMAP-
KW Rule:MF_00380}.
SQ SEQUENCE 111 AA; 12131 MW; 365FD8A110A517D1 CRC64;
MTGTGKTVTR VDLCEAVYQK VGLSRTESSA FVELVLKEIT DCLEKGETVK LSSFGSFMVR
KKGERIGRNP KTGTEVPISP RRVMVFKPSA ILKQRINGDS TAVGNGKDHD D
//
