ID A0A164UNE1_DAUCS Unreviewed; 462 AA.
AC A0A164UNE1;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=DCAR_026202 {ECO:0000313|EMBL:KZM89127.1};
OS Daucus carota subsp. sativus (Carrot).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC Daucus; Daucus sect. Daucus.
OX NCBI_TaxID=79200 {ECO:0000313|EMBL:KZM89127.1, ECO:0000313|Proteomes:UP000077755};
RN [1] {ECO:0000313|EMBL:KZM89127.1, ECO:0000313|Proteomes:UP000077755}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DH1 {ECO:0000313|Proteomes:UP000077755};
RC TISSUE=Leaf {ECO:0000313|EMBL:KZM89127.1};
RX PubMed=27158781; DOI=10.1038/ng.3565;
RA Iorizzo M., Ellison S., Senalik D., Zeng P., Satapoomin P., Huang J.,
RA Bowman M., Iovene M., Sanseverino W., Cavagnaro P., Yildiz M.,
RA Macko-Podgorni A., Moranska E., Grzebelus E., Grzebelus D., Ashrafi H.,
RA Zheng Z., Cheng S., Spooner D., Van Deynze A., Simon P.;
RT "A high-quality carrot genome assembly provides new insights into
RT carotenoid accumulation and asterid genome evolution.";
RL Nat. Genet. 48:657-666(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZM89127.1}.
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DR EMBL; LNRQ01000007; KZM89127.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A164UNE1; -.
DR STRING; 79200.A0A164UNE1; -.
DR EnsemblPlants; KZM89127; KZM89127; DCAR_026202.
DR Gramene; KZM89127; KZM89127; DCAR_026202.
DR Proteomes; UP000077755; Chromosome 7.
DR GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF38; LYSINE-SPECIFIC DEMETHYLASE REF6; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000077755};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 30..71
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 203..369
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
SQ SEQUENCE 462 AA; 52610 MW; BF520D1D44E3716E CRC64;
MARIRGRAGY KPRPYKKTEV LQWLKSLPLA PEFHPTLEEF QDPIGYIQKI EKEASVYGIC
KIIPPVLLPL MKTTFDQLNK SLLACSASLE GELKPTFTTR VQEVGSCQRK HYPVIKSVRE
SGKTYTVAEF EAKAKSFEKS FFKGSSIKKG ALSSLEIESL YWNANAEKPF EVEYANDMHI
SAFVELEKRR GGDGLNEYLN VGDSNWNLRG TARLEGCPLR FIKDDIPGVT SPMVYMGMLF
TWFAWHVEDH DLHSLNYMHM GDKKTWYGVP QDSAAAFEEV IRNHGYRAEM NPISTFASLA
KKTTVISPEV FLNAGIRCCR LVQNPGEFIV TFPRAYHSGF SHGFNCAEAS NIATPEWLRF
AREAEIRRAA INYPPLFSHI QLLYDHALSF SSRVPVSMET RNSGLEEKHK GEGERLVKEL
FVQDVKHNTN LLHSLRKRSP PILLPCDFFK GNFPDLHNEP EH
//
