ID A0A164Z4I4_9SYNE Unreviewed; 749 AA.
AC A0A164Z4I4;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=3'-to-5' exoribonuclease RNase R {ECO:0000313|EMBL:SAY38719.1};
GN ORFNames=FLM9_633 {ECO:0000313|EMBL:SAY38719.1};
OS Candidatus Synechococcus spongiarum.
OC Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae;
OC Synechococcus.
OX NCBI_TaxID=431041 {ECO:0000313|EMBL:SAY38719.1, ECO:0000313|Proteomes:UP000182631};
RN [1] {ECO:0000313|Proteomes:UP000182631}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA liu f.;
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FITM01000073; SAY38719.1; -; Genomic_DNA.
DR RefSeq; WP_074457174.1; NZ_FITM01000073.1.
DR AlphaFoldDB; A0A164Z4I4; -.
DR Proteomes; UP000182631; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR CDD; cd04471; S1_RNase_R; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 2.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR013223; RNase_B_OB_dom.
DR InterPro; IPR001900; RNase_II/R.
DR InterPro; IPR003029; S1_domain.
DR PANTHER; PTHR23355:SF9; DIS3-LIKE EXONUCLEASE 2; 1.
DR PANTHER; PTHR23355; RIBONUCLEASE; 1.
DR Pfam; PF08206; OB_RNB; 1.
DR Pfam; PF00773; RNB; 1.
DR Pfam; PF00575; S1; 1.
DR SMART; SM00955; RNB; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 3.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000182631}.
FT DOMAIN 653..734
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 749 AA; 82356 MW; 9D0644339B6C3A88 CRC64;
MKFSVAKLLS QLHPDTPTTI TQLQKKLSLS KKSEKTQLDI ALTALEVLGL LRHQDGKLYL
QPHDHLVPAR LRSSSKGFCF AVREGGGDIY IRDQHLNHAW DGDRVLVKIV REGGRRRSPE
GIVQCVLERA HGTLLAVPKR SDHGLLVAQP LDDRLPSIQL PEDDSRHLDP SDHGVAAEVR
LDRFPIAQHL AQGTIIRSLS TSGGEDQDQR LIQTKHGIFG RSARSRATLQ PLDLQKREDL
RSLPTLLLEV YGVSDAPQLP ALSLETTATG SRLWVHTPAL AERFAALGYV DLWMRERGAA
ICMGRRWQGL VSAKLVKAST FAVDKEQAAV SVALDLGPDG TLAGYRFCRS RIKPHVLLNA
RDFHALVGQG FQLPAPLQHL KSHMDTIGQL HTVLEAVRQQ RLAAGSIELD LRRPALKAVG
DLQTVTLDEK LQGWLPRAQD HEPMAWLREA ALVANRAFGH HCAALKLPAF YVQNAPAEAG
DLNGVARTAL GLESNLELGQ DGNAPDGATM AAAFRTVARS RALQQQLRNV VKPCTFASEP
GPYMPAGERQ AYAPFVGAAL HYGELFNQQL LTTLLCHGKR NDGSHREDVD LASHQSRDQV
SWEVLSPDYG KPFKDALAAG LCQHLLDRSR FAAVVEADWI ALCQARHLES RVGATMNGVI
SGVQSYGLFV ELPPTHGEGL VHISALRDDW YEFRARQHRL LGRKSERQFM LGDAILVEIQ
KVDVLRNQID LAVVTTASPA EPPEVAGQA
//
