ID   A0A165XTB3_DAUCS        Unreviewed;      1089 AA.
AC   A0A165XTB3;
DT   06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT   06-JUL-2016, sequence version 1.
DT   27-MAR-2024, entry version 29.
DE   RecName: Full=Helicase ATP-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=DCAR_014137 {ECO:0000313|EMBL:KZM98501.1};
OS   Daucus carota subsp. sativus (Carrot).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC   Daucus; Daucus sect. Daucus.
OX   NCBI_TaxID=79200 {ECO:0000313|EMBL:KZM98501.1, ECO:0000313|Proteomes:UP000077755};
RN   [1] {ECO:0000313|EMBL:KZM98501.1, ECO:0000313|Proteomes:UP000077755}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. DH1 {ECO:0000313|Proteomes:UP000077755};
RC   TISSUE=Leaf {ECO:0000313|EMBL:KZM98501.1};
RX   PubMed=27158781; DOI=10.1038/ng.3565;
RA   Iorizzo M., Ellison S., Senalik D., Zeng P., Satapoomin P., Huang J.,
RA   Bowman M., Iovene M., Sanseverino W., Cavagnaro P., Yildiz M.,
RA   Macko-Podgorni A., Moranska E., Grzebelus E., Grzebelus D., Ashrafi H.,
RA   Zheng Z., Cheng S., Spooner D., Van Deynze A., Simon P.;
RT   "A high-quality carrot genome assembly provides new insights into
RT   carotenoid accumulation and asterid genome evolution.";
RL   Nat. Genet. 48:657-666(2016).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KZM98501.1}.
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DR   EMBL; LNRQ01000004; KZM98501.1; -; Genomic_DNA.
DR   RefSeq; XP_017243832.1; XM_017388343.1.
DR   AlphaFoldDB; A0A165XTB3; -.
DR   STRING; 79200.A0A165XTB3; -.
DR   EnsemblPlants; KZM98501; KZM98501; DCAR_014137.
DR   GeneID; 108215777; -.
DR   Gramene; KZM98501; KZM98501; DCAR_014137.
DR   KEGG; dcr:108215777; -.
DR   OMA; HPWISKF; -.
DR   OrthoDB; 2909243at2759; -.
DR   Proteomes; UP000077755; Chromosome 4.
DR   GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR   CDD; cd18808; SF1_C_Upf1; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR045055; DNA2/NAM7-like.
DR   InterPro; IPR041679; DNA2/NAM7-like_C.
DR   InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR   InterPro; IPR045529; DUF6469.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR047187; SF1_C_Upf1.
DR   PANTHER; PTHR10887:SF519; AAA DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR10887; DNA2/NAM7 HELICASE FAMILY; 1.
DR   Pfam; PF13086; AAA_11; 2.
DR   Pfam; PF13087; AAA_12; 1.
DR   Pfam; PF20073; DUF6469; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000077755}.
FT   DOMAIN          69..192
FT                   /note="DUF6469"
FT                   /evidence="ECO:0000259|Pfam:PF20073"
FT   DOMAIN          241..473
FT                   /note="DNA2/NAM7 helicase helicase"
FT                   /evidence="ECO:0000259|Pfam:PF13086"
FT   DOMAIN          589..658
FT                   /note="DNA2/NAM7 helicase helicase"
FT                   /evidence="ECO:0000259|Pfam:PF13086"
FT   DOMAIN          666..863
FT                   /note="DNA2/NAM7 helicase-like C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF13087"
FT   REGION          446..467
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        446..465
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1089 AA;  123988 MW;  4461EE284FA3100F CRC64;
     MDEESSLIDI VFSWSLPDIL NHHLYKHKVE QIPDTFSSLL HYMNSFTFPL IEETRADLCS
     SITNVSKAPT FQVLEIKDAE PASNMNYAIS IGRNQDIEFD ADMYEPGYGD LIAFTVVRPK
     CGDDLYTDAT NFTVALVQRV KIKKDNVVLL VTSSKPIDPE ESMHKKLDAT NLFVVFLMNL
     TTNLRIWEAL KFQLDGRNAK IINKVLQHDF VIGRRCNFCF KEGNYRITAS ILAPTVRSFS
     LNTSQAEAVS NSFAMKYCCH ENSVKLIWGP PGTGKTKTVA VLLYALLEQK CRTVTCAPTN
     IAVLEVAARL LRLVTQSNGY ETYGLGDIIL LGNRKRMKID DHTDLLNIFL DYRTKILLKC
     FAPKSGWTNC LSSLISLVED PEEQYRLYLR NEKYEESDEE DGYDEEEVEV SCAPGNRSLK
     YTQEKNVWKE VIVKILRKND KKINWRREDP SREDKHSKSG RKKQNDFSQN QKVMNFEDFF
     RSRFFSKREF MKFCIVNLLT HLPTSFISLD NVKNMMTALR LLESFGTSLH SDAVNGIGLK
     DVLAQIMNVG QFVNVFSILK KTRKELLNIL KSLYVGISVP NIYDEYSIRM FCLQNACLFF
     CTASSSSKLH VTSMELLVVD EAAQLKECES NIPLQLPGLR HAILVGDEMQ LSALVKSQAS
     DEAGFGRSLF TRLVSLGYKK DLLDIQYRMH PSISLFPNKE FYHRQIADGP NVRQKNYQKH
     ILRGDMYGSY SFINIPFGRE ESCDGYSLKN RVEVAVIAEV VANLFKESTG SKQKLSVGVI
     SPYNAQVVAI QENFGTRYSM DPKSDFSVTV RSIDGFQGGE EDVILLSTVR CNGNGSVGFL
     SNCQRANVAL TRARYCLWIF GNEATLRGSR SVWRNLINDA KNRRCYYNAQ DDHRLAKTIV
     ATLVDIDRFE VSLSIDSLLF QEAKWKVCFS NNFWTSMSNI QNIEIRKETL SHLTKLSNGL
     RWPCNDKSRI VIDGKSAQLV ELCKVNCMNY IVWSVDVVKV HSSYSQVLKV WDMLPLSKIP
     NLLKDMDYSF GSYNMDLMYL CTFKKLEGTL EVPVTWPVHS DVARKITLPG TDPMQHLCST
     FAAMSLNDN
//