ID A0A165YYE2_DAUCS Unreviewed; 363 AA.
AC A0A165YYE2;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=DCAR_013249 {ECO:0000313|EMBL:KZM99389.1};
OS Daucus carota subsp. sativus (Carrot).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC Daucus; Daucus sect. Daucus.
OX NCBI_TaxID=79200 {ECO:0000313|EMBL:KZM99389.1, ECO:0000313|Proteomes:UP000077755};
RN [1] {ECO:0000313|EMBL:KZM99389.1, ECO:0000313|Proteomes:UP000077755}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DH1 {ECO:0000313|Proteomes:UP000077755};
RC TISSUE=Leaf {ECO:0000313|EMBL:KZM99389.1};
RX PubMed=27158781; DOI=10.1038/ng.3565;
RA Iorizzo M., Ellison S., Senalik D., Zeng P., Satapoomin P., Huang J.,
RA Bowman M., Iovene M., Sanseverino W., Cavagnaro P., Yildiz M.,
RA Macko-Podgorni A., Moranska E., Grzebelus E., Grzebelus D., Ashrafi H.,
RA Zheng Z., Cheng S., Spooner D., Van Deynze A., Simon P.;
RT "A high-quality carrot genome assembly provides new insights into
RT carotenoid accumulation and asterid genome evolution.";
RL Nat. Genet. 48:657-666(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZM99389.1}.
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DR EMBL; LNRQ01000004; KZM99389.1; -; Genomic_DNA.
DR RefSeq; XP_017248400.1; XM_017392911.1.
DR AlphaFoldDB; A0A165YYE2; -.
DR STRING; 79200.A0A165YYE2; -.
DR EnsemblPlants; KZM99389; KZM99389; DCAR_013249.
DR GeneID; 108219449; -.
DR Gramene; KZM99389; KZM99389; DCAR_013249.
DR KEGG; dcr:108219449; -.
DR OMA; RSFNDGF; -.
DR OrthoDB; 3127428at2759; -.
DR Proteomes; UP000077755; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR48033; RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN; 1.
DR PANTHER; PTHR48033:SF10; RRM DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000077755};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 19..95
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 107..185
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 182..203
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 363 AA; 38029 MW; 5A1552A7648B2BF0 CRC64;
MDSKSKNSNP RSGDGASPGK IFIGGLPKDT LYNAFTKHFG KYGEITDSVI MKDRHTGVPR
GFGFITYADP SVVDKVIEDP HVFNGKQVEI KRTIPKGAAQ SKDFKTKKIF VGGIPATVTG
DELKDFFSKY GNVVEHQIIC DHETNRSRGF GFVIFDNEEV VDEMLSKTNM IDMAGTKVEI
KKAEPKKASN HPPAPAYGSK PRARSFSDEF GRFNSSYGGY DSGYVGPGPY RTPGGLGRLS
GYGGYGGASD YGGYGDFGGS ALGGYRGESS LGYSSRFGAY AGGYSGGYGG SGLGGYGRAE
GLGSYGRGEG LGGYGRGEGY GSYGGSGYGG GYDSGPGASY GGTGGLYGRG GYSGSSRYHP
YGR
//
