ID A0A165Z5L4_DAUCS Unreviewed; 328 AA.
AC A0A165Z5L4;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=MADS-box domain-containing protein {ECO:0000259|PROSITE:PS50066};
GN ORFNames=DCAR_013000 {ECO:0000313|EMBL:KZM99638.1};
OS Daucus carota subsp. sativus (Carrot).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC Daucus; Daucus sect. Daucus.
OX NCBI_TaxID=79200 {ECO:0000313|EMBL:KZM99638.1};
RN [1] {ECO:0000313|EMBL:KZM99638.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaf {ECO:0000313|EMBL:KZM99638.1};
RX PubMed=27158781; DOI=10.1038/ng.3565;
RA Iorizzo M., Ellison S., Senalik D., Zeng P., Satapoomin P., Huang J.,
RA Bowman M., Iovene M., Sanseverino W., Cavagnaro P., Yildiz M.,
RA Macko-Podgorni A., Moranska E., Grzebelus E., Grzebelus D., Ashrafi H.,
RA Zheng Z., Cheng S., Spooner D., Van Deynze A., Simon P.;
RT "A high-quality carrot genome assembly provides new insights into
RT carotenoid accumulation and asterid genome evolution.";
RL Nat. Genet. 48:657-666(2016).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZM99638.1}.
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DR EMBL; LNRQ01000004; KZM99638.1; -; Genomic_DNA.
DR RefSeq; XP_017246734.1; XM_017391245.1.
DR AlphaFoldDB; A0A165Z5L4; -.
DR EnsemblPlants; KZM99638; KZM99638; DCAR_013000.
DR GeneID; 108218336; -.
DR Gramene; KZM99638; KZM99638; DCAR_013000.
DR KEGG; dcr:108218336; -.
DR OMA; YLFTINP; -.
DR OrthoDB; 941828at2759; -.
DR Proteomes; UP000077755; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000987; F:cis-regulatory region sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd00266; MADS_SRF_like; 1.
DR Gene3D; 3.40.1810.10; Transcription factor, MADS-box; 1.
DR InterPro; IPR033897; MADS_SRF-like.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR PANTHER; PTHR48019:SF224; MADS-BOX DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR48019; SERUM RESPONSE FACTOR HOMOLOG; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SRF-like; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000077755};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..47
FT /note="MADS-box"
FT /evidence="ECO:0000259|PROSITE:PS50066"
SQ SEQUENCE 328 AA; 37859 MW; 4F67582583704948 CRC64;
MGRAKLNMEL IEKAKVRTTT FLTRKKNLTK KAKELATLCG IKTAVIINPP RQVTPQGRPL
KLETYPENDD VVLELIDKYK GQSSEDRKKR TSLLPCFFQE RNRKVQRALA KLRSTNVRSK
YPTWDLRFDN FMEEDLRNVA VFLENKIVDA KGKLGQMKAN VSNSNNIYNA YLLQQQQMML
TRERSMEVGN QNGINYLFTI NPPQTGFMQV PVPMPMPIQQ QNFAFLDHYQ DQRMVTFGHD
YIGGAPNIEY NANSSTPLYN YPMMTGDSIT YANNSLRDPQ NYSDEGRQPF AHHQMENHHM
RLGSTPHQMV ATSHQVDAHA QFDENHIE
//
