ID A0A166HVR5_DAUCS Unreviewed; 724 AA.
AC A0A166HVR5;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=PB1 domain-containing protein {ECO:0000259|PROSITE:PS51745};
GN ORFNames=DCAR_003107 {ECO:0000313|EMBL:KZN10451.1};
OS Daucus carota subsp. sativus (Carrot).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC Daucus; Daucus sect. Daucus.
OX NCBI_TaxID=79200 {ECO:0000313|EMBL:KZN10451.1};
RN [1] {ECO:0000313|EMBL:KZN10451.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaf {ECO:0000313|EMBL:KZN10451.1};
RX PubMed=27158781; DOI=10.1038/ng.3565;
RA Iorizzo M., Ellison S., Senalik D., Zeng P., Satapoomin P., Huang J.,
RA Bowman M., Iovene M., Sanseverino W., Cavagnaro P., Yildiz M.,
RA Macko-Podgorni A., Moranska E., Grzebelus E., Grzebelus D., Ashrafi H.,
RA Zheng Z., Cheng S., Spooner D., Van Deynze A., Simon P.;
RT "A high-quality carrot genome assembly provides new insights into
RT carotenoid accumulation and asterid genome evolution.";
RL Nat. Genet. 48:657-666(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZN10451.1}.
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DR EMBL; LNRQ01000001; KZN10451.1; -; Genomic_DNA.
DR RefSeq; XP_017229736.1; XM_017374247.1.
DR AlphaFoldDB; A0A166HVR5; -.
DR STRING; 79200.A0A166HVR5; -.
DR EnsemblPlants; KZN10451; KZN10451; DCAR_003107.
DR GeneID; 108204683; -.
DR Gramene; KZN10451; KZN10451; DCAR_003107.
DR KEGG; dcr:108204683; -.
DR OMA; TCYMQLG; -.
DR OrthoDB; 5479011at2759; -.
DR Proteomes; UP000077755; Chromosome 1.
DR CDD; cd05992; PB1; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR000270; PB1_dom.
DR InterPro; IPR044517; PHOX1-4.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR46183; PROTEIN CLMP1; 1.
DR PANTHER; PTHR46183:SF4; PROTEIN PHOX4; 1.
DR Pfam; PF00564; PB1; 1.
DR SMART; SM00666; PB1; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF54277; CAD & PB1 domains; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51745; PB1; 1.
DR PROSITE; PS50005; TPR; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000077755};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 39..72
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 113..146
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 253..332
FT /note="PB1"
FT /evidence="ECO:0000259|PROSITE:PS51745"
FT REGION 184..220
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 344..365
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 203..220
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 724 AA; 82932 MW; 686B933DC8086F57 CRC64;
MGKPIGKKKI AEGNVKNNKV SDRNSKLFDE DTAVFINLSQ EYKEEGNILF QKHDYEGAIL
KYEKALNLLP KNHIDIAYLR SNIAGCFMQM GLAEFPRAIN ECNLALEVAP KYSKALLRRA
KCYEGLNRLD LALRDVNYVL SMEPNNLLAL EIMDKLKKTF EQKGLSIEDK EMVLPTEYVE
PNVNRAWKDN RKKKGRQQTS KQQQNRTKEK EAKIKNKDVK VEDKKSEDIE KKMPEVKVVV
DEKVSPMEDK MVTKPVKLVY GEDIRFTQLP VGCGIRLVRE VVQDRFPYIK GVLIKYKDPE
GDLITITTTD ELRLAEASAG AIGSLRLYIV EVSPEKEPVY ERMDDEAELE NLNSKPSNGE
GNGGVDKVKE IENAPSCVED WIVQFARLFK NHVGFDSDSY LDLHELGMKL YSEAMEETVT
NEDAQGLFET AADKFQEMSA LSLFNCGNVH MNMARKRVFF GEDSSTDTIM TQVKISYEWA
KKEYKMAGMK YEEALQIQSD FYEALLALGL QQFEQAKLCW YYAIGNKIDL KTWPSIEVLD
LYNKAEDSLD RGMQMWEELE EQRLNGLYKA DKYKIDLNKM GLNGLVKELS ADEAAEQAGN
MGSQIYLLWG TVLYERSIVE FKLDLPTWEE CLEVAVEKFE LSGASQTDIA VMIKNHISNG
EALEGFGFKI DEIIQAWNEM YDAKRWQTGV PSFRLEPMFR RRVPKLHSVL EHVSLFCTTD
DSTK
//