GenomeNet

Database: UniProt
Entry: A0A166HVR5_DAUCS
LinkDB: A0A166HVR5_DAUCS
Original site: A0A166HVR5_DAUCS 
ID   A0A166HVR5_DAUCS        Unreviewed;       724 AA.
AC   A0A166HVR5;
DT   06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT   06-JUL-2016, sequence version 1.
DT   27-MAR-2024, entry version 28.
DE   RecName: Full=PB1 domain-containing protein {ECO:0000259|PROSITE:PS51745};
GN   ORFNames=DCAR_003107 {ECO:0000313|EMBL:KZN10451.1};
OS   Daucus carota subsp. sativus (Carrot).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC   Daucus; Daucus sect. Daucus.
OX   NCBI_TaxID=79200 {ECO:0000313|EMBL:KZN10451.1};
RN   [1] {ECO:0000313|EMBL:KZN10451.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   TISSUE=Leaf {ECO:0000313|EMBL:KZN10451.1};
RX   PubMed=27158781; DOI=10.1038/ng.3565;
RA   Iorizzo M., Ellison S., Senalik D., Zeng P., Satapoomin P., Huang J.,
RA   Bowman M., Iovene M., Sanseverino W., Cavagnaro P., Yildiz M.,
RA   Macko-Podgorni A., Moranska E., Grzebelus E., Grzebelus D., Ashrafi H.,
RA   Zheng Z., Cheng S., Spooner D., Van Deynze A., Simon P.;
RT   "A high-quality carrot genome assembly provides new insights into
RT   carotenoid accumulation and asterid genome evolution.";
RL   Nat. Genet. 48:657-666(2016).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KZN10451.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; LNRQ01000001; KZN10451.1; -; Genomic_DNA.
DR   RefSeq; XP_017229736.1; XM_017374247.1.
DR   AlphaFoldDB; A0A166HVR5; -.
DR   STRING; 79200.A0A166HVR5; -.
DR   EnsemblPlants; KZN10451; KZN10451; DCAR_003107.
DR   GeneID; 108204683; -.
DR   Gramene; KZN10451; KZN10451; DCAR_003107.
DR   KEGG; dcr:108204683; -.
DR   OMA; TCYMQLG; -.
DR   OrthoDB; 5479011at2759; -.
DR   Proteomes; UP000077755; Chromosome 1.
DR   CDD; cd05992; PB1; 1.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   InterPro; IPR000270; PB1_dom.
DR   InterPro; IPR044517; PHOX1-4.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR46183; PROTEIN CLMP1; 1.
DR   PANTHER; PTHR46183:SF4; PROTEIN PHOX4; 1.
DR   Pfam; PF00564; PB1; 1.
DR   SMART; SM00666; PB1; 1.
DR   SMART; SM00028; TPR; 3.
DR   SUPFAM; SSF54277; CAD & PB1 domains; 1.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51745; PB1; 1.
DR   PROSITE; PS50005; TPR; 2.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000077755};
KW   TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT   REPEAT          39..72
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          113..146
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   DOMAIN          253..332
FT                   /note="PB1"
FT                   /evidence="ECO:0000259|PROSITE:PS51745"
FT   REGION          184..220
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          344..365
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        203..220
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   724 AA;  82932 MW;  686B933DC8086F57 CRC64;
     MGKPIGKKKI AEGNVKNNKV SDRNSKLFDE DTAVFINLSQ EYKEEGNILF QKHDYEGAIL
     KYEKALNLLP KNHIDIAYLR SNIAGCFMQM GLAEFPRAIN ECNLALEVAP KYSKALLRRA
     KCYEGLNRLD LALRDVNYVL SMEPNNLLAL EIMDKLKKTF EQKGLSIEDK EMVLPTEYVE
     PNVNRAWKDN RKKKGRQQTS KQQQNRTKEK EAKIKNKDVK VEDKKSEDIE KKMPEVKVVV
     DEKVSPMEDK MVTKPVKLVY GEDIRFTQLP VGCGIRLVRE VVQDRFPYIK GVLIKYKDPE
     GDLITITTTD ELRLAEASAG AIGSLRLYIV EVSPEKEPVY ERMDDEAELE NLNSKPSNGE
     GNGGVDKVKE IENAPSCVED WIVQFARLFK NHVGFDSDSY LDLHELGMKL YSEAMEETVT
     NEDAQGLFET AADKFQEMSA LSLFNCGNVH MNMARKRVFF GEDSSTDTIM TQVKISYEWA
     KKEYKMAGMK YEEALQIQSD FYEALLALGL QQFEQAKLCW YYAIGNKIDL KTWPSIEVLD
     LYNKAEDSLD RGMQMWEELE EQRLNGLYKA DKYKIDLNKM GLNGLVKELS ADEAAEQAGN
     MGSQIYLLWG TVLYERSIVE FKLDLPTWEE CLEVAVEKFE LSGASQTDIA VMIKNHISNG
     EALEGFGFKI DEIIQAWNEM YDAKRWQTGV PSFRLEPMFR RRVPKLHSVL EHVSLFCTTD
     DSTK
//
DBGET integrated database retrieval system