ID A0A166HX12_DAUCS Unreviewed; 198 AA.
AC A0A166HX12;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KZN10497.1};
GN ORFNames=DCAR_003153 {ECO:0000313|EMBL:KZN10497.1};
OS Daucus carota subsp. sativus (Carrot).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC Daucus; Daucus sect. Daucus.
OX NCBI_TaxID=79200 {ECO:0000313|EMBL:KZN10497.1};
RN [1] {ECO:0000313|EMBL:KZN10497.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaf {ECO:0000313|EMBL:KZN10497.1};
RX PubMed=27158781; DOI=10.1038/ng.3565;
RA Iorizzo M., Ellison S., Senalik D., Zeng P., Satapoomin P., Huang J.,
RA Bowman M., Iovene M., Sanseverino W., Cavagnaro P., Yildiz M.,
RA Macko-Podgorni A., Moranska E., Grzebelus E., Grzebelus D., Ashrafi H.,
RA Zheng Z., Cheng S., Spooner D., Van Deynze A., Simon P.;
RT "A high-quality carrot genome assembly provides new insights into
RT carotenoid accumulation and asterid genome evolution.";
RL Nat. Genet. 48:657-666(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZN10497.1}.
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DR EMBL; LNRQ01000001; KZN10497.1; -; Genomic_DNA.
DR RefSeq; XP_017232426.1; XM_017376937.1.
DR RefSeq; XP_017232435.1; XM_017376946.1.
DR RefSeq; XP_017233273.1; XM_017377784.1.
DR AlphaFoldDB; A0A166HX12; -.
DR STRING; 79200.A0A166HX12; -.
DR EnsemblPlants; KZN10497; KZN10497; DCAR_003153.
DR GeneID; 108206586; -.
DR GeneID; 108207325; -.
DR Gramene; KZN10497; KZN10497; DCAR_003153.
DR KEGG; dcr:108206586; -.
DR KEGG; dcr:108207325; -.
DR OMA; ECPSKTY; -.
DR OrthoDB; 325019at2759; -.
DR Proteomes; UP000077755; Chromosome 1.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR46565; COLD SHOCK DOMAIN PROTEIN 2; 1.
DR PANTHER; PTHR46565:SF20; COLD SHOCK PROTEIN 2; 1.
DR Pfam; PF00313; CSD; 1.
DR Pfam; PF00098; zf-CCHC; 2.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SMART; SM00343; ZnF_C2HC; 2.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 2.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
DR PROSITE; PS50158; ZF_CCHC; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00047}; Reference proteome {ECO:0000313|Proteomes:UP000077755};
KW Zinc {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00047}.
FT DOMAIN 7..73
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 125..138
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 180..195
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 65..90
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 198 AA; 18440 MW; 372215103DC25231 CRC64;
MGEDGSRLKG SVKWFNDTKG FGFITPDEGG EDLFVHQSSI KSDGFRSLAE GESVEFVIEN
GSDGRTKAVD VTGPDGASVQ GSGRGGGGGG GRGGGGYGGG GGGYGGGGGG YGGGGGYGGG
GGGGCYKCGE NGHMARDCDN GGGGGGYGGG GGGYGGGGGY GGGRGGGRGG GRGGGGGGGC
YQCGEDGHFA RDCPNSNR
//
