GenomeNet

Database: UniProt
Entry: A0A166QK00_9ACTN
LinkDB: A0A166QK00_9ACTN
Original site: A0A166QK00_9ACTN 
ID   A0A166QK00_9ACTN        Unreviewed;       319 AA.
AC   A0A166QK00;
DT   06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT   06-JUL-2016, sequence version 1.
DT   24-JAN-2024, entry version 36.
DE   RecName: Full=Small ribosomal subunit protein uS3 {ECO:0000256|ARBA:ARBA00035257, ECO:0000256|HAMAP-Rule:MF_01309};
GN   Name=rpsC {ECO:0000256|HAMAP-Rule:MF_01309};
GN   ORFNames=UG55_10659 {ECO:0000313|EMBL:OAA21069.1};
OS   Frankia sp. EI5c.
OC   Bacteria; Actinomycetota; Actinomycetes; Frankiales; Frankiaceae; Frankia.
OX   NCBI_TaxID=683316 {ECO:0000313|EMBL:OAA21069.1, ECO:0000313|Proteomes:UP000077018};
RN   [1] {ECO:0000313|EMBL:OAA21069.1, ECO:0000313|Proteomes:UP000077018}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EI5c {ECO:0000313|EMBL:OAA21069.1,
RC   ECO:0000313|Proteomes:UP000077018};
RX   PubMed=27389275;
RA   D'Angelo T., Oshone R., Abebe-Akele F., Simpson S., Morris K., Thomas W.K.,
RA   Tisa L.S.;
RT   "Permanent Draft Genome Sequence for Frankia sp. Strain EI5c, a Single-
RT   Spore Isolate of a Nitrogen-Fixing Actinobacterium, Isolated from the Root
RT   Nodules of Elaeagnus angustifolia.";
RL   Genome Announc. 4:e00660-16(2016).
RN   [2] {ECO:0000313|EMBL:OAA21069.1, ECO:0000313|Proteomes:UP000077018}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EI5c {ECO:0000313|EMBL:OAA21069.1,
RC   ECO:0000313|Proteomes:UP000077018};
RA   Wen L., He K., Yang H.;
RL   Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Binds the lower part of the 30S subunit head. Binds mRNA in
CC       the 70S ribosome, positioning it for translation.
CC       {ECO:0000256|ARBA:ARBA00024998, ECO:0000256|HAMAP-Rule:MF_01309}.
CC   -!- SUBUNIT: Part of the 30S ribosomal subunit. Forms a tight complex with
CC       proteins S10 and S14. {ECO:0000256|HAMAP-Rule:MF_01309}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uS3 family.
CC       {ECO:0000256|ARBA:ARBA00010761, ECO:0000256|HAMAP-Rule:MF_01309,
CC       ECO:0000256|RuleBase:RU003624}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OAA21069.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; LRTK01000065; OAA21069.1; -; Genomic_DNA.
DR   RefSeq; WP_066071933.1; NZ_LRTK01000065.1.
DR   AlphaFoldDB; A0A166QK00; -.
DR   STRING; 683316.UG55_10659; -.
DR   PATRIC; fig|683316.3.peg.4609; -.
DR   OrthoDB; 9806396at2; -.
DR   Proteomes; UP000077018; Unassembled WGS sequence.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003729; F:mRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd02412; KH-II_30S_S3; 1.
DR   Gene3D; 3.30.300.20; -; 1.
DR   Gene3D; 3.30.1140.32; Ribosomal protein S3, C-terminal domain; 1.
DR   HAMAP; MF_01309_B; Ribosomal_S3_B; 1.
DR   InterPro; IPR004087; KH_dom.
DR   InterPro; IPR015946; KH_dom-like_a/b.
DR   InterPro; IPR004044; KH_dom_type_2.
DR   InterPro; IPR009019; KH_sf_prok-type.
DR   InterPro; IPR036419; Ribosomal_S3_C_sf.
DR   InterPro; IPR005704; Ribosomal_uS3_bac-typ.
DR   InterPro; IPR001351; Ribosomal_uS3_C.
DR   InterPro; IPR018280; Ribosomal_uS3_CS.
DR   NCBIfam; TIGR01009; rpsC_bact; 1.
DR   PANTHER; PTHR11760:SF19; 30S RIBOSOMAL PROTEIN S3, CHLOROPLASTIC; 1.
DR   PANTHER; PTHR11760; 30S/40S RIBOSOMAL PROTEIN S3; 1.
DR   Pfam; PF07650; KH_2; 1.
DR   Pfam; PF00189; Ribosomal_S3_C; 1.
DR   SMART; SM00322; KH; 1.
DR   SUPFAM; SSF54814; Prokaryotic type KH domain (KH-domain type II); 1.
DR   SUPFAM; SSF54821; Ribosomal protein S3 C-terminal domain; 1.
DR   PROSITE; PS50823; KH_TYPE_2; 1.
DR   PROSITE; PS00548; RIBOSOMAL_S3; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000077018};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW   Rule:MF_01309};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW   Rule:MF_01309};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW   Rule:MF_01309};
KW   rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|HAMAP-
KW   Rule:MF_01309}.
FT   DOMAIN          38..106
FT                   /note="KH type-2"
FT                   /evidence="ECO:0000259|PROSITE:PS50823"
FT   REGION          217..319
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        217..232
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        284..298
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   319 AA;  34496 MW;  FE5EF6DA20CF3F8B CRC64;
     MGQKVNQHGF RLGITSEFTS RWYADKQYKA YVGEDVKIRK MMSRGMERAG ISRVDIERTQ
     GRLRVDIHTA RPGIVIGRRG AEADRIRGDL EKLTGKQVQL NILEVKNPET DAQLVAQGVA
     EQLSSRVSFR RAMRKAMQSA MKGGAKGIRV QCSGRLGGAE MSRSEFYREG RVPLHTLRAD
     IDYGFYEART NFGRIGVKVW IYKGDIVQSR AEREAQEALL RQQRRERPRR GPRSGSSGTT
     QGGTDAGRAA ARAGERRGRG GGGAGGGAAE KGGAEKAPAE KATAESTPAS TAPTETVAPE
     VTSAPVVAEA QAAPEKAEG
//
DBGET integrated database retrieval system