ID A0A167EJQ8_9PEZI Unreviewed; 1708 AA.
AC A0A167EJQ8;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU004279};
DE EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};
GN ORFNames=CI238_08152 {ECO:0000313|EMBL:KZL85216.1};
OS Colletotrichum incanum.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum;
OC Colletotrichum spaethianum species complex.
OX NCBI_TaxID=1573173 {ECO:0000313|EMBL:KZL85216.1, ECO:0000313|Proteomes:UP000076584};
RN [1] {ECO:0000313|EMBL:KZL85216.1, ECO:0000313|Proteomes:UP000076584}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MAFF 238704 {ECO:0000313|EMBL:KZL85216.1,
RC ECO:0000313|Proteomes:UP000076584};
RA Hacquard S., Kracher B., Hiruma K., Weinman A., Muench P., Garrido Oter R.,
RA Ver Loren van Themaat E., Dallerey J.-F., Damm U., Henrissat B.,
RA Lespinet O., Thon M., Kemen E., McHardy A.C., Schulze-Lefert P.,
RA O'Connell R.J.;
RT "Survival trade-offs in plant roots during colonization by closely related
RT pathogenic and mutualistic fungi.";
RL Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000256|RuleBase:RU004279}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550,
CC ECO:0000256|RuleBase:RU004279};
CC -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC {ECO:0000256|RuleBase:RU004279}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZL85216.1}.
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DR EMBL; LFIW01000709; KZL85216.1; -; Genomic_DNA.
DR STRING; 1573173.A0A167EJQ8; -.
DR OrthoDB; 169836at2759; -.
DR Proteomes; UP000076584; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd02735; RNAP_I_Rpa1_C; 1.
DR CDD; cd01435; RNAP_I_RPA1_N; 1.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 1.10.150.390; -; 1.
DR Gene3D; 1.10.357.120; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 3.30.70.2850; -; 2.
DR Gene3D; 3.30.1490.180; RNA polymerase ii; 1.
DR Gene3D; 4.10.860.120; RNA polymerase II, clamp domain; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR047107; DNA-dir_RNA_pol1_lsu_C.
DR InterPro; IPR015699; DNA-dir_RNA_pol1_lsu_N.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR000722; RNA_pol_asu.
DR InterPro; IPR006592; RNA_pol_N.
DR InterPro; IPR007080; RNA_pol_Rpb1_1.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR044893; RNA_pol_Rpb1_clamp_domain.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF11; DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA1; 1.
DR Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR SMART; SM00663; RPOLA_N; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|RuleBase:RU004279};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695,
KW ECO:0000256|RuleBase:RU004279}; Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000076584};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU004279};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU004279}.
SQ SEQUENCE 1708 AA; 187997 MW; 713383BE903F4BFF CRC64;
MNISQPISSS IETVEFTFLT DEEIKAISVK RIENDSTFDN LLNPVPGGLY DPALGSWGDA
LCATCNLNQS SCPGHAGHIE LPVPVYHPVF LDQVLRLLRS QCVYCKGFRM RHREINRYSC
KLRLLQHGLL HEAHLVDAIG EELKGLALPG VPTDYESEAE EEGTSSVDNV IGAREAYVRQ
ALKSHKLSLG EVRKGKHEGA IEMRRELIKD FLTQITKPRR CDNCGGISPA YRKDRFVKIF
EKALSERDLA QMAQRNLHVK DSMATAARAR KSKSNRGVAD ADEGVADVDM TSAEENDVEM
RDASGDEQDL ADKEDGTAAD AVAVAPGQQR YISAMEVRAR LRELFEKEQD IMSLVYNSKP
MTKKAAKVSA DMFFIRTILV PPNKFRPEAR TGDSQISEAQ QNSLYKMIMR NCGNIARIHQ
SVGATDQYGR PRDITDLHQV WTELQESVNS LIDKSKNPVQ GAAAKRNEDG IKQKLEKKEG
LFRKNMMGKR VNFAARSVIS PDPNIETNEI GVPPVFARKL TYPEPVTSHN FRDMQQAVIN
GVDKWPGAAA IEYENGQIVN LRSKSVDDRV SLANQLLAPT NNQMSGMKGK KVYRHLTNGD
VVLMNRQPTL HKPSIMGHRV RVLPGEKTIR MHYANCNTYN ADFDGDEMNM HFPQNEVARA
EALQIADTDH QYLSGTAGKP LRGLIQDHLS VSVALCNKDT FFDRDSYQQL IYSALRPESG
HILGERIELL PPAVIKPRPR WTGKQVISTI LKNIKPPNGE GLWMTGKCQV KAEQWGKSHA
EEGSVLFQDG QFLTGILDKA HLGPSPGGLI HSIHEIYGPA VAGKLLSGMG RLLTRYLNMR
AFTCGMDDLR LTSEGEHARR EALKAAKNIG LEVAAKYVSL EDKAPNSTDP ELLVRLEEVM
RDDTKQEGLD MLMNQSSGMV SSAVTTACLP VGLVKQFPKN QMQSMTTSGA KGSQVNANLI
SCNLGQQVLE GRRVPLMVSG KSLPCFKPFE TDVRAGGYIV QRFLTGIRPQ EYYFHHMAGR
EGLIDTAVKT SRSGYLQRCI IKGMEGLTVT YDSTVRDADG TLVQFLYGED GLDPTKQKYL
TDFSFVLRNV GSESAQLNFS NGFKEKLAGS KDEILKHMKS AIKHAKLNSA AAKDPIISMV
NPARVAFATS EKFYEQMTKY IKDNKDGLIR DKSGAPSGLI NAPAVSKKSA ELVFAAKYMR
SLVEAGEGVG IVAGQSVGEP STQMTLNTFH LAGHSAKNVT LGIPRLREIL MTASRSISTP
AMTLLLHEEL SAAEGEVFAK SISVLPLADV LDTATVNERI GKGNNGALAK LYDVRLNFFP
AKEYTKAYAI DTTDVMDTVE KRFLDHLLKI MVREIKKRRS ESTSATPDVG VKAGVVEMAT
GNSESRAAND DNDDEDDDGD GDATNAKNKA NREEAVSYGP NDDEDDAIQR QMERENSPEE
DEGFGGSPPP RADKDGSDDE EEDGDGDADS DEGVLRAERV KDRYLRVTKF RNDEAGEWCE
FTLEFEANTP KVLMLNIVQA AVKKSVVQQI PGVGSCTFTA DHKVTDSAGN DVSVPAIYTS
GCNLKAMQKY GDFINPNKIA TNDIGAVLDV YGVEACRNNI VSELAGVFGG HGISVDNRHL
NLIADYMTRN GDYTPFNRNG LRGNVSPFTK MSFETTLAFL KDAVLDGDWD DLRTPSGRIV
MGRLGKIGTG AFDVLTALPT HHMSSNVE
//
