ID A0A174N0A1_9BACT Unreviewed; 185 AA.
AC A0A174N0A1;
DT 07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT 07-SEP-2016, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=RNA polymerase sigma-70 factor {ECO:0000313|EMBL:RHH84548.1};
GN ORFNames=DW192_02970 {ECO:0000313|EMBL:RHH84548.1}, DW916_04535
GN {ECO:0000313|EMBL:RHA88001.1}, DWW35_12560
GN {ECO:0000313|EMBL:RGU92991.1}, DXA63_10145
GN {ECO:0000313|EMBL:RGX93409.1}, F7D28_09950
GN {ECO:0000313|EMBL:MQO95946.1}, F7D42_14460
GN {ECO:0000313|EMBL:MQO56866.1}, F7D58_05780
GN {ECO:0000313|EMBL:MQO71924.1}, F7D59_07945
GN {ECO:0000313|EMBL:MQN89778.1}, F7D66_08510
GN {ECO:0000313|EMBL:MQO01260.1}, F7D71_01420
GN {ECO:0000313|EMBL:MQN76546.1}, F7D72_08175
GN {ECO:0000313|EMBL:MQN69033.1}, F7D97_12270
GN {ECO:0000313|EMBL:MQN10676.1}, F7E03_06930
GN {ECO:0000313|EMBL:MQM49789.1};
OS Segatella copri.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Segatella.
OX NCBI_TaxID=165179 {ECO:0000313|EMBL:RHH84548.1, ECO:0000313|Proteomes:UP000284548};
RN [1] {ECO:0000313|Proteomes:UP000284548, ECO:0000313|Proteomes:UP000284990}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF15-25 {ECO:0000313|EMBL:RGU92991.1,
RC ECO:0000313|Proteomes:UP000285236}, AM16-54
RC {ECO:0000313|EMBL:RHH84548.1, ECO:0000313|Proteomes:UP000284548},
RC AM42-23AC {ECO:0000313|EMBL:RHA88001.1,
RC ECO:0000313|Proteomes:UP000284990}, and OF03-3
RC {ECO:0000313|EMBL:RGX93409.1, ECO:0000313|Proteomes:UP000285604};
RA Zou Y., Xue W., Luo G.;
RT "A genome reference for cultivated species of the human gut microbiota.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000358159, ECO:0000313|Proteomes:UP000384796}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BU4165 {ECO:0000313|EMBL:MQO01260.1,
RC ECO:0000313|Proteomes:UP000473126}, BU41712
RC {ECO:0000313|EMBL:MQN76546.1, ECO:0000313|Proteomes:UP000423156},
RC BU41813 {ECO:0000313|EMBL:MQN69033.1,
RC ECO:0000313|Proteomes:UP000384796}, BVe4116
RC {ECO:0000313|EMBL:MQO95946.1, ECO:0000313|Proteomes:UP000427436},
RC BVe41219 {ECO:0000313|EMBL:MQO56866.1,
RC ECO:0000313|Proteomes:UP000358159}, IAK2716
RC {ECO:0000313|EMBL:MQO71924.1}, iAK2716
RC {ECO:0000313|Proteomes:UP000486770}, iK21513
RC {ECO:0000313|Proteomes:UP000406735}, IK21513
RC {ECO:0000313|EMBL:MQN10676.1}, IP54 {ECO:0000313|EMBL:MQN89778.1},
RC iP54 {ECO:0000313|Proteomes:UP000420635}, iT212
RC {ECO:0000313|Proteomes:UP000440283}, and IT212
RC {ECO:0000313|EMBL:MQM49789.1};
RA Fehlner-Peach H., Magnabosco C., Raghavan V., Scher J.U., Tett A.,
RA Cox L.M., Gottsegen C., Watters A., Wiltshire- Gordon J.D., Segata N.,
RA Bonneau R., Littman D.R.;
RT "Distinct polysaccharide growth profiles of human intestinal Prevotella
RT copri isolates.";
RL Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RHH84548.1}.
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DR EMBL; VZDE01000048; MQM49789.1; -; Genomic_DNA.
DR EMBL; VZCY01000100; MQN10676.1; -; Genomic_DNA.
DR EMBL; VZCA01000058; MQN69033.1; -; Genomic_DNA.
DR EMBL; VZBZ01000008; MQN76546.1; -; Genomic_DNA.
DR EMBL; VZBQ01000089; MQN89778.1; -; Genomic_DNA.
DR EMBL; VZBX01000077; MQO01260.1; -; Genomic_DNA.
DR EMBL; VZAZ01000075; MQO56866.1; -; Genomic_DNA.
DR EMBL; VZAT01000048; MQO71924.1; -; Genomic_DNA.
DR EMBL; VZAK01000055; MQO95946.1; -; Genomic_DNA.
DR EMBL; QRYP01000042; RGU92991.1; -; Genomic_DNA.
DR EMBL; QSCI01000045; RGX93409.1; -; Genomic_DNA.
DR EMBL; QSFW01000007; RHA88001.1; -; Genomic_DNA.
DR EMBL; QRKB01000003; RHH84548.1; -; Genomic_DNA.
DR Proteomes; UP000284548; Unassembled WGS sequence.
DR Proteomes; UP000284990; Unassembled WGS sequence.
DR Proteomes; UP000285236; Unassembled WGS sequence.
DR Proteomes; UP000285604; Unassembled WGS sequence.
DR Proteomes; UP000358159; Unassembled WGS sequence.
DR Proteomes; UP000384796; Unassembled WGS sequence.
DR Proteomes; UP000406735; Unassembled WGS sequence.
DR Proteomes; UP000420635; Unassembled WGS sequence.
DR Proteomes; UP000423156; Unassembled WGS sequence.
DR Proteomes; UP000427436; Unassembled WGS sequence.
DR Proteomes; UP000440283; Unassembled WGS sequence.
DR Proteomes; UP000473126; Unassembled WGS sequence.
DR Proteomes; UP000486770; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR014327; RNA_pol_sigma70_bacteroid.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02985; Sig70_bacteroi1; 1.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF46; ECF RNA POLYMERASE SIGMA FACTOR SIGG; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
FT DOMAIN 22..87
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 119..169
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
SQ SEQUENCE 185 AA; 21963 MW; 5EB7AA46E6AAB4E4 CRC64;
MEIEKETILL MSKGDKKAYE TMFRRFYPKV HRFVAMLLKN EDDADDVSQL IFLKVWNKRE
KFADIQNFDS YLFILAKYTV INYISSKHII PIDIDSLPDR YANESSPHDD VVAKDTQLLI
DMVVESMPQQ RQMIYRMSRE QHLKNEEIAQ RLGIQKKTVE NHLNLALKEI KKALYLMILL
PCHWV
//
