UniProt: A0A174P0M9

Database: UniProt
Entry: A0A174P0M9_9BACE

LinkDB:  A0A174P0M9_9BACE 
Original site:  A0A174P0M9_9BACE

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Ontology (5)   
   GO (5)   
Gene (2)   
   KEGG GENES (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   EMBL (11)   
Protein domain (6)   
   InterPro (4)   
   Pfam (1)   
   PROSITE (1)   
Literature (1)   
   PubMed (1)   
All databases (26)   

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ID   A0A174P0M9_9BACE        Unreviewed;       205 AA.
AC   A0A174P0M9;
DT   07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT   07-SEP-2016, sequence version 1.
DT   27-MAR-2024, entry version 43.
DE   RecName: Full=Large ribosomal subunit protein uL3 {ECO:0000256|HAMAP-Rule:MF_01325};
GN   Name=rplC {ECO:0000256|HAMAP-Rule:MF_01325,
GN   ECO:0000313|EMBL:CUP52330.1};
GN   ORFNames=DW190_13665 {ECO:0000313|EMBL:RHH88536.1}, DW794_03315
GN   {ECO:0000313|EMBL:RHD52474.1}, DWY26_16425
GN   {ECO:0000313|EMBL:RGR68394.1}, DXA49_15460
GN   {ECO:0000313|EMBL:RGY23821.1}, ERS852494_04190
GN   {ECO:0000313|EMBL:CUQ17487.1}, ERS852558_00426
GN   {ECO:0000313|EMBL:CUP52330.1}, F2Y31_15835
GN   {ECO:0000313|EMBL:KAA5496838.1}, F2Y35_04470
GN   {ECO:0000313|EMBL:KAA5494099.1}, F2Y36_14785
GN   {ECO:0000313|EMBL:KAA5461812.1}, F2Y39_09590
GN   {ECO:0000313|EMBL:KAA5477842.1}, NXW23_01535
GN   {ECO:0000313|EMBL:UVQ97099.1};
OS   Bacteroides caccae.
OC   Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=47678 {ECO:0000313|EMBL:CUP52330.1, ECO:0000313|Proteomes:UP000095725};
RN   [1] {ECO:0000313|Proteomes:UP000095657, ECO:0000313|Proteomes:UP000095725}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=2789STDY5834880 {ECO:0000313|EMBL:CUQ17487.1,
RC   ECO:0000313|Proteomes:UP000095657}, and 2789STDY5834946
RC   {ECO:0000313|EMBL:CUP52330.1, ECO:0000313|Proteomes:UP000095725};
RG   Pathogen Informatics;
RL   Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000283512, ECO:0000313|Proteomes:UP000284205}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AF24-29LB {ECO:0000313|EMBL:RGR68394.1,
RC   ECO:0000313|Proteomes:UP000284205}, AM16-49B
RC   {ECO:0000313|EMBL:RHH88536.1, ECO:0000313|Proteomes:UP000283512},
RC   AM31-16AC {ECO:0000313|EMBL:RHD52474.1,
RC   ECO:0000313|Proteomes:UP000284689}, and OF02-6LB
RC   {ECO:0000313|EMBL:RGY23821.1, ECO:0000313|Proteomes:UP000284431};
RA   Zou Y., Xue W., Luo G.;
RT   "A genome reference for cultivated species of the human gut microbiota.";
RL   Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|Proteomes:UP000368418, ECO:0000313|Proteomes:UP000427825}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BIOML-A19 {ECO:0000313|EMBL:KAA5496838.1,
RC   ECO:0000313|Proteomes:UP000368418}, BIOML-A21
RC   {ECO:0000313|EMBL:KAA5494099.1, ECO:0000313|Proteomes:UP000491168},
RC   BIOML-A25 {ECO:0000313|EMBL:KAA5477842.1,
RC   ECO:0000313|Proteomes:UP000427825}, and BIOML-A31
RC   {ECO:0000313|EMBL:KAA5461812.1, ECO:0000313|Proteomes:UP000475905};
RX   PubMed=31477907; DOI=.1038/s41591-019-0559-3;
RA   Poyet M., Groussin M., Gibbons S.M., Avila-Pacheco J., Jiang X.,
RA   Kearney S.M., Perrotta A.R., Berdy B., Zhao S., Lieberman T.D.,
RA   Swanson P.K., Smith M., Roesemann S., Alexander J.E., Rich S.A., Livny J.,
RA   Vlamakis H., Clish C., Bullock K., Deik A., Scott J., Pierce K.A.,
RA   Xavier R.J., Alm E.J.;
RT   "A library of human gut bacterial isolates paired with longitudinal
RT   multiomics data enables mechanistic microbiome research.";
RL   Nat. Med. 25:1442-1452(2019).
RN   [4] {ECO:0000313|EMBL:UVQ97099.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=BFG-474 {ECO:0000313|EMBL:UVQ97099.1};
RA   Tisza M.J., Smith D., Dekker J.P.;
RT   "Genome Sequencing of Bacteroides fragilis Group Isolates with Nanopore
RT   Technology.";
RL   Submitted (AUG-2022) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC       near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S
CC       subunit. {ECO:0000256|HAMAP-Rule:MF_01325,
CC       ECO:0000256|RuleBase:RU003906}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. Forms a cluster with
CC       proteins L14 and L19. {ECO:0000256|HAMAP-Rule:MF_01325,
CC       ECO:0000256|RuleBase:RU003906}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL3 family.
CC       {ECO:0000256|ARBA:ARBA00006540, ECO:0000256|HAMAP-Rule:MF_01325,
CC       ECO:0000256|RuleBase:RU003905}.
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DR   EMBL; CZBL01000001; CUP52330.1; -; Genomic_DNA.
DR   EMBL; CZAI01000014; CUQ17487.1; -; Genomic_DNA.
DR   EMBL; VVYP01000019; KAA5461812.1; -; Genomic_DNA.
DR   EMBL; VVYJ01000004; KAA5477842.1; -; Genomic_DNA.
DR   EMBL; VVYF01000004; KAA5494099.1; -; Genomic_DNA.
DR   EMBL; VVYD01000016; KAA5496838.1; -; Genomic_DNA.
DR   EMBL; QRUO01000017; RGR68394.1; -; Genomic_DNA.
DR   EMBL; QSCS01000026; RGY23821.1; -; Genomic_DNA.
DR   EMBL; QSJD01000003; RHD52474.1; -; Genomic_DNA.
DR   EMBL; QRKD01000013; RHH88536.1; -; Genomic_DNA.
DR   EMBL; CP103166; UVQ97099.1; -; Genomic_DNA.
DR   RefSeq; WP_005675424.1; NZ_WQQZ01000029.1.
DR   STRING; 47678.ERS852494_04190; -.
DR   GeneID; 75111671; -.
DR   KEGG; bcac:CGC64_01800; -.
DR   Proteomes; UP000095657; Unassembled WGS sequence.
DR   Proteomes; UP000095725; Unassembled WGS sequence.
DR   Proteomes; UP000283512; Unassembled WGS sequence.
DR   Proteomes; UP000284205; Unassembled WGS sequence.
DR   Proteomes; UP000284431; Unassembled WGS sequence.
DR   Proteomes; UP000284689; Unassembled WGS sequence.
DR   Proteomes; UP000368418; Unassembled WGS sequence.
DR   Proteomes; UP000427825; Unassembled WGS sequence.
DR   Proteomes; UP000475905; Unassembled WGS sequence.
DR   Proteomes; UP000491168; Unassembled WGS sequence.
DR   Proteomes; UP001060260; Chromosome.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.160.810; -; 1.
DR   Gene3D; 2.40.30.10; Translation factors; 1.
DR   HAMAP; MF_01325_B; Ribosomal_L3_B; 1.
DR   InterPro; IPR000597; Ribosomal_uL3.
DR   InterPro; IPR019927; Ribosomal_uL3_bac/org-type.
DR   InterPro; IPR019926; Ribosomal_uL3_CS.
DR   InterPro; IPR009000; Transl_B-barrel_sf.
DR   NCBIfam; TIGR03625; L3_bact; 1.
DR   PANTHER; PTHR11229:SF8; 39S RIBOSOMAL PROTEIN L3, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR11229; 50S RIBOSOMAL PROTEIN L3; 1.
DR   Pfam; PF00297; Ribosomal_L3; 1.
DR   SUPFAM; SSF50447; Translation proteins; 1.
DR   PROSITE; PS00474; RIBOSOMAL_L3; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000095657};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW   Rule:MF_01325};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW   Rule:MF_01325};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01325,
KW   ECO:0000256|RuleBase:RU003906};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01325,
KW   ECO:0000256|RuleBase:RU003906}.
SQ   SEQUENCE   205 AA;  21913 MW;  E8F061876C6D1874 CRC64;
     MPGLLGKKIG MTSVFSADGK NVPCTVIEAG PCVVTQVKTV EKDGYAAVQL GFQDKKEKHT
     TKPLMGHFKR AGVTPKRHLA EFKEFETELN LGDTVTVELF NDANFVDVVG TSKGKGFQGV
     VKRHGFGGVG QTTHGQHNRA RKPGSIGACS YPAKVFKGMR MGGQLGGDRV TVQNLQVLKV
     IADHNLLLIK GSIPGCKGSI VLIEK
//

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