ID A0A175YJB8_DAUCS Unreviewed; 600 AA.
AC A0A175YJB8;
DT 07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT 07-SEP-2016, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=PB1 domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=DCAR_030919 {ECO:0000313|EMBL:KZM83350.1};
OS Daucus carota subsp. sativus (Carrot).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC Daucus; Daucus sect. Daucus.
OX NCBI_TaxID=79200 {ECO:0000313|EMBL:KZM83350.1};
RN [1] {ECO:0000313|EMBL:KZM83350.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaf {ECO:0000313|EMBL:KZM83350.1};
RX PubMed=27158781; DOI=10.1038/ng.3565;
RA Iorizzo M., Ellison S., Senalik D., Zeng P., Satapoomin P., Huang J.,
RA Bowman M., Iovene M., Sanseverino W., Cavagnaro P., Yildiz M.,
RA Macko-Podgorni A., Moranska E., Grzebelus E., Grzebelus D., Ashrafi H.,
RA Zheng Z., Cheng S., Spooner D., Van Deynze A., Simon P.;
RT "A high-quality carrot genome assembly provides new insights into
RT carotenoid accumulation and asterid genome evolution.";
RL Nat. Genet. 48:657-666(2016).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZM83350.1}.
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DR EMBL; LNRQ01000009; KZM83350.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A175YJB8; -.
DR STRING; 79200.A0A175YJB8; -.
DR EnsemblPlants; KZM83350; KZM83350; DCAR_030919.
DR Gramene; KZM83350; KZM83350; DCAR_030919.
DR Proteomes; UP000077755; Chromosome 9.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; AP2/ERF domain; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR045012; NLP.
DR InterPro; IPR000270; PB1_dom.
DR InterPro; IPR003035; RWP-RK_dom.
DR PANTHER; PTHR32002:SF35; PROTEIN NLP6; 1.
DR PANTHER; PTHR32002; PROTEIN NLP8; 1.
DR Pfam; PF00847; AP2; 1.
DR Pfam; PF00564; PB1; 1.
DR Pfam; PF02042; RWP-RK; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SMART; SM00666; PB1; 1.
DR SUPFAM; SSF54277; CAD & PB1 domains; 1.
DR SUPFAM; SSF54171; DNA-binding domain; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
DR PROSITE; PS51745; PB1; 1.
DR PROSITE; PS51519; RWP_RK; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000077755};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 23..74
FT /note="AP2/ERF"
FT /evidence="ECO:0000259|PROSITE:PS51032"
FT DOMAIN 420..499
FT /note="RWP-RK"
FT /evidence="ECO:0000259|PROSITE:PS51519"
FT DOMAIN 512..594
FT /note="PB1"
FT /evidence="ECO:0000259|PROSITE:PS51745"
FT REGION 474..498
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 600 AA; 68147 MW; 1BDB3DB7FD47A2BA CRC64;
MDDSVTSMIR ALYEVVYVKS VCRYMGVSKD SFGGWEAKIR GVSIGNFDTE EEAALAFDHA
AFRLRGRNAK LNFPNYSAKG ELMSPDRPLT SHEKRVERGA DAMDFGSGLC VGADTGELLA
QSNKFIAPEE NEEANMFQAQ DGAHAFQQCP NVEFDWDAIT PQEGVAVGNQ GDAVKELYGQ
DDWYAIYAET QSSNFQTEKS PPHQETMEIE EDRLMLDHSH QLPIVEDSMH IKGLIVGAEK
VDSYIHVSHK TCIAETSKEG KPSENEYSYD IRSSHFGGLR DDVTNLFNVS RSKFKRICRD
DGIKRWRSCK KKLDSRRSSK LVRVSDEDPG EQILIFRASR GVLENQWMMS FHKKLHFAGD
AAQELHVQDG YATNAETQSS NFRTEKSPPH QHTMHKYGLV VGAEKVDSCN HVLHKTCIEE
TSKEGKPSEN EYSYDILSAH FGKLQDDVAK HFNVSRSKFK RICRDNGIKR WRSHKKKLDS
RRSSKLGRVS DEDPSRTDSY CPGIPPLQDT DMITVKATYN EVAIKFELLD SSRMVDLEDS
VIERLKVERD TFSIKYQDDE GDWVLIACDK DLQNCIKTSR LSEKTTIKML VDRPIKHYAS
//
