ID A0A177CIZ2_9PLEO Unreviewed; 1057 AA.
AC A0A177CIZ2;
DT 07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT 07-SEP-2016, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=ATP-dependent RNA helicase-like protein DOB1 {ECO:0000313|EMBL:OAG07231.1};
GN ORFNames=CC84DRAFT_1143616 {ECO:0000313|EMBL:OAG07231.1};
OS Paraphaeosphaeria sporulosa.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Pleosporomycetidae; Pleosporales; Massarineae; Didymosphaeriaceae;
OC Paraphaeosphaeria.
OX NCBI_TaxID=1460663 {ECO:0000313|EMBL:OAG07231.1, ECO:0000313|Proteomes:UP000077069};
RN [1] {ECO:0000313|EMBL:OAG07231.1, ECO:0000313|Proteomes:UP000077069}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AP3s5-JAC2a {ECO:0000313|EMBL:OAG07231.1,
RC ECO:0000313|Proteomes:UP000077069};
RG DOE Joint Genome Institute;
RA Zeiner C.A., Purvine S.O., Zink E.M., Wu S., Pasa-Tolic L., Chaput D.L.,
RA Haridas S., Grigoriev I.V., Santelli C.M., Hansel C.M.;
RT "Comparative analysis of secretome profiles of manganese(II)-oxidizing
RT ascomycete fungi.";
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the helicase family. SKI2 subfamily.
CC {ECO:0000256|ARBA:ARBA00010140}.
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DR EMBL; KV441551; OAG07231.1; -; Genomic_DNA.
DR RefSeq; XP_018037596.1; XM_018176421.1.
DR AlphaFoldDB; A0A177CIZ2; -.
DR STRING; 1460663.A0A177CIZ2; -.
DR GeneID; 28759907; -.
DR InParanoid; A0A177CIZ2; -.
DR OrthoDB; 1352at2759; -.
DR Proteomes; UP000077069; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR CDD; cd18024; DEXHc_Mtr4-like; 1.
DR CDD; cd13154; KOW_Mtr4; 1.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 1.
DR Gene3D; 2.40.30.300; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR025696; MTR4_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF7; EXOSOME RNA HELICASE MTR4; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:OAG07231.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000077069}.
FT DOMAIN 147..303
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 415..587
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..69
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 608..656
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1057 AA; 119693 MW; D9B996E73EF65D2F CRC64;
MDELFDVFED GPQAAKATAP KSKPKQTKKR QANGEVKSPV PDASMQDAPA PADEQATYQK
RLKRDLEPEP VVTDAFETEQ SREVAASAGL QGQTQQDGQA VVLSHQVRHQ VALPPDYDYV
PISEHKPPEE PARTWPFTLD PFQQVSIASI QRGESVLVSA HTSAGKTVVA EYAIAQCLKN
NQRVIYTSPI KALSNQKYRE FTAEFGDVGL MTGDVTINPT ATCLVMTTEI LRSMLYRGSE
IMREVAWVVF DEVHYLRDKS RGVVWEETII LLPDKVRYVF LSATIPNAMQ FAEWITKTHK
QPCHVVYTDF RPTPLQHYFF PEGADGIHLI VDEKGAFREE NFQKAMASIA DKAGTAADDF
LAKRKGKGKD KKTNKGGNKD QSDIYKIVKM IMLKNYNPVI VFSFSKRECE NYALAMSQLA
FNDESEKAMV SKVFNSAIEM LSEEDRSLAQ IQNILPLLRR GIGVHHSGLL PILKETIEIL
FQEGLIKVLF ATETFSIGLN MPAKTVVFTS VRKFDGVSQR WVTPSEFIQM SGRAGRRGLD
ERGIVIMMIN EQMEPAVAKE IVRGQQDNLN SAFHLGYNMV LNLLRVEGIS PEFMLERCFS
QFQNTASVSN LEKKLRELEN ERENMAITDE TAIRDYYNLR EQLDNLTKEM RDVIQHPKNC
LQFLQPGRLV RIKYNQHDFG WGAVVNVTAR KPERGEKFRD QESYVLDCAL VVASDTKYVP
YSNNGLPPGV LPPPVGDKGK VESVPVLLSA MESIGHLRLF LPKEIKTTEN KVHVQKALDE
VKKRFPDGIA ILDPIENMKI TDEVFKRTLR KIEVLESRLL SNPLHNSPRL LELYNQYAKK
IAIGDKIKAL KKEISAALSI IHMDELNARK RVLRRLGFIK DGDVVQLKAR VACEISTGDE
IVLSELLFEK EFNKLTPEQC AACLSCFIFE EKSKESPSLR EDLAEPFRKI QKKARDIVKV
SQDAKMPLNE DEYVQSFKCE LMEVVYQWCK GASFAEICKM TDVYEGSLIR LFRRLEELLR
QVAQAAKVMG SEELEQKFTA ALELVRRDLV AAQSLYL
//
