ID A0A177DM30_ALTAL Unreviewed; 1215 AA.
AC A0A177DM30;
DT 07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT 07-SEP-2016, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=ATP-dependent RNA helicase {ECO:0000313|EMBL:RYN75165.1};
DE SubName: Full=p-loop containing nucleoside triphosphate hydrolase protein {ECO:0000313|EMBL:OAG20072.1};
GN ORFNames=AA0117_g6560 {ECO:0000313|EMBL:RYN75165.1}, CC77DRAFT_1020618
GN {ECO:0000313|EMBL:OAG20072.1};
OS Alternaria alternata (Alternaria rot fungus) (Torula alternata).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Alternaria;
OC Alternaria sect. Alternaria; Alternaria alternata complex.
OX NCBI_TaxID=5599 {ECO:0000313|EMBL:OAG20072.1, ECO:0000313|Proteomes:UP000077248};
RN [1] {ECO:0000313|EMBL:OAG20072.1, ECO:0000313|Proteomes:UP000077248}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SRC1lrK2f {ECO:0000313|EMBL:OAG20072.1,
RC ECO:0000313|Proteomes:UP000077248};
RG DOE Joint Genome Institute;
RA Zeiner C.A., Purvine S.O., Zink E.M., Wu S., Pasa-Tolic L., Chaput D.L.,
RA Haridas S., Grigoriev I.V., Santelli C.M., Hansel C.M.;
RT "Comparative analysis of secretome profiles of manganese(II)-oxidizing
RT ascomycete fungi.";
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000291422}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FERA 1177 {ECO:0000313|Proteomes:UP000291422};
RA Armitage A.D., Cockerton H.M., Sreenivasaprasad S., Woodhall J., Lane C.,
RA Harrison R.J., Clarkson J.P.;
RT "Genomics, evolutionary history and diagnostics of the Alternaria alternata
RT species group including apple and Asian pear pathotypes.";
RL bioRxiv 0:0-0(2019).
RN [3] {ECO:0000313|EMBL:RYN75165.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=FERA 1177 {ECO:0000313|EMBL:RYN75165.1};
RA Armitage A.D., Cockerton H.M., Sreenivasaprasad S., Woodhall J., Lane C.,
RA Harrison R.J., Clarkson J.P.;
RT "Genomics, evolutionary history and diagnostics of the Alternaria alternata
RT species group including apple and Asian pear pathotypes.";
RL J. ISSAAS 0:0-0(2019).
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DR EMBL; KV441479; OAG20072.1; -; Genomic_DNA.
DR EMBL; PDXD01000015; RYN75165.1; -; Genomic_DNA.
DR RefSeq; XP_018385493.1; XM_018525088.1.
DR STRING; 5599.A0A177DM30; -.
DR GeneID; 29110682; -.
DR KEGG; aalt:CC77DRAFT_1020618; -.
DR VEuPathDB; FungiDB:CC77DRAFT_1020618; -.
DR OMA; DPMVAPE; -.
DR OrthoDB; 3682876at2759; -.
DR Proteomes; UP000077248; Unassembled WGS sequence.
DR Proteomes; UP000291422; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProt.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd21691; GH2-like_DHX8; 1.
DR CDD; cd05684; S1_DHX8_helicase; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003029; S1_domain.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF85; ATP-DEPENDENT RNA HELICASE DHX8; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR Pfam; PF00575; S1; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:RYN75165.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:OAG20072.1};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000077248}.
FT DOMAIN 250..320
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 561..724
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 742..922
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 79..101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 145..241
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1006..1026
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 150..177
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 178..193
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 194..215
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 223..241
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1009..1025
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1215 AA; 136297 MW; 2D3D6824103E0B16 CRC64;
MDDLANLEFL SLVSKVTSEI QNHVGVSDKT LAEFVIDQHA KCKGVTDFKN QLEAMGAEFP
QSLVESIDRL ILTLHPKYKN KGANGKESGA NGEDGGDATD RKTRVFKGLA IPDKDVDYEV
ADEESEKDAP QVDALDDTFA MLEGLAGKAP SSKPKERSRK RSMSPYDSDD DMSRSKRHRR
RDRSYSRSRS RSPRRGRQQN DELVFEDEFG RTRTVKPNNK QRSRKKYRDE DLDEFRRPPT
PELDDEPVLY KVYDGKVTGV KDFGCFVNLQ GVKGKVDGLV HVTQMMEGRV NHPSDLVSRW
QEVKVKVIKN ENNRISLSMK EVDQRTGQDL APGKRIASFG TGANSQGLGG IPGFDSAVPI
VEDGFNSRKN GMRKRMTSPE RWEIKQLIAS GVIPKSDYPD IDEDFNAHIN GEGGFEEEED
VDIEVREEEP PFLAGQTKQS LELSPIRVVK APDGSLNRAA MAGDTLAKER RDLKQQEAQE
KAAKEAANVD LSSQWNDPMA QQRQFASDLR NTRTNEPSQA LPEWKKISTN SKETSFGKRT
NMSIKEQRES LPVFKFRNQL LEAVATHQIL IVVGDTGSGK TTQMTQYLAE AGYGNELVIG
CTQPRRVAAM SVAKRVAEEV GCALGNEVGY TIRFEDKTSP DTRIKYMTDG ILQREILLDP
MLSKYSCIML DEAHERTIAT DVLFGLLKKT LKRRPDMKLI VTSATLDADK FSEYFYKCPI
FSIPGRTFPV EVMYSKEPES DYLDAALVTV MQIHLTEPAG DILLFLTGKE EIDSSCEIIS
ERMKALGPNV PELMILPIYG ALPSEVASRI FEPAPNGTRK VVIATNIAET SLTIDGIYYV
VDPGFVKQSS YDGKLGMDRL QITPISQAQA RQRSGRAGRT GPGKCFRLYT EAAFQNEMLP
TTIPEIQRQN LSNTILMLKA MGINDLLHFD FMDPPPTNTM LTALEELYQL GALDDEGLLT
RLGRQMADFP MDPSLSKSLI KSVDLQCSDE ILTIVAMISA TQNVFHRPRD KQQQADQKKQ
KFNDPSGDHI TLLNVYNGWK QGGFSTPWCH ENFVMPKNMQ RVRDVRNQLL QIMARHKHQV
VSCGRNTIKV RQALCSGFFR NSARKDPAEG YKTLVEGTPV YLHPSSSLFG KPAEHVIYHS
LVETTKEYMH FCSAIEPKWL VEAAPTFFKV APTDRLSKRK KAERIQPLHN KFAGEDDWRL
SAQRRAGRGG GGTWG
//