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Database: UniProt
Entry: A0A177DM30_ALTAL
LinkDB: A0A177DM30_ALTAL
Original site: A0A177DM30_ALTAL 
ID   A0A177DM30_ALTAL        Unreviewed;      1215 AA.
AC   A0A177DM30;
DT   07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT   07-SEP-2016, sequence version 1.
DT   24-JAN-2024, entry version 37.
DE   SubName: Full=ATP-dependent RNA helicase {ECO:0000313|EMBL:RYN75165.1};
DE   SubName: Full=p-loop containing nucleoside triphosphate hydrolase protein {ECO:0000313|EMBL:OAG20072.1};
GN   ORFNames=AA0117_g6560 {ECO:0000313|EMBL:RYN75165.1}, CC77DRAFT_1020618
GN   {ECO:0000313|EMBL:OAG20072.1};
OS   Alternaria alternata (Alternaria rot fungus) (Torula alternata).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC   Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Alternaria;
OC   Alternaria sect. Alternaria; Alternaria alternata complex.
OX   NCBI_TaxID=5599 {ECO:0000313|EMBL:OAG20072.1, ECO:0000313|Proteomes:UP000077248};
RN   [1] {ECO:0000313|EMBL:OAG20072.1, ECO:0000313|Proteomes:UP000077248}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SRC1lrK2f {ECO:0000313|EMBL:OAG20072.1,
RC   ECO:0000313|Proteomes:UP000077248};
RG   DOE Joint Genome Institute;
RA   Zeiner C.A., Purvine S.O., Zink E.M., Wu S., Pasa-Tolic L., Chaput D.L.,
RA   Haridas S., Grigoriev I.V., Santelli C.M., Hansel C.M.;
RT   "Comparative analysis of secretome profiles of manganese(II)-oxidizing
RT   ascomycete fungi.";
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000291422}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=FERA 1177 {ECO:0000313|Proteomes:UP000291422};
RA   Armitage A.D., Cockerton H.M., Sreenivasaprasad S., Woodhall J., Lane C.,
RA   Harrison R.J., Clarkson J.P.;
RT   "Genomics, evolutionary history and diagnostics of the Alternaria alternata
RT   species group including apple and Asian pear pathotypes.";
RL   bioRxiv 0:0-0(2019).
RN   [3] {ECO:0000313|EMBL:RYN75165.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=FERA 1177 {ECO:0000313|EMBL:RYN75165.1};
RA   Armitage A.D., Cockerton H.M., Sreenivasaprasad S., Woodhall J., Lane C.,
RA   Harrison R.J., Clarkson J.P.;
RT   "Genomics, evolutionary history and diagnostics of the Alternaria alternata
RT   species group including apple and Asian pear pathotypes.";
RL   J. ISSAAS 0:0-0(2019).
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DR   EMBL; KV441479; OAG20072.1; -; Genomic_DNA.
DR   EMBL; PDXD01000015; RYN75165.1; -; Genomic_DNA.
DR   RefSeq; XP_018385493.1; XM_018525088.1.
DR   STRING; 5599.A0A177DM30; -.
DR   GeneID; 29110682; -.
DR   KEGG; aalt:CC77DRAFT_1020618; -.
DR   VEuPathDB; FungiDB:CC77DRAFT_1020618; -.
DR   OMA; DPMVAPE; -.
DR   OrthoDB; 3682876at2759; -.
DR   Proteomes; UP000077248; Unassembled WGS sequence.
DR   Proteomes; UP000291422; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProt.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR   GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR   CDD; cd21691; GH2-like_DHX8; 1.
DR   CDD; cd05684; S1_DHX8_helicase; 1.
DR   CDD; cd18791; SF2_C_RHA; 1.
DR   Gene3D; 1.20.120.1080; -; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR048333; HA2_WH.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR003029; S1_domain.
DR   PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR   PANTHER; PTHR18934:SF85; ATP-DEPENDENT RNA HELICASE DHX8; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF21010; HA2_C; 1.
DR   Pfam; PF04408; HA2_N; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   Pfam; PF00575; S1; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Helicase {ECO:0000313|EMBL:RYN75165.1};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:OAG20072.1};
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW   mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000077248}.
FT   DOMAIN          250..320
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          561..724
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          742..922
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          79..101
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          145..241
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1006..1026
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        150..177
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        178..193
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        194..215
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        223..241
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1009..1025
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1215 AA;  136297 MW;  2D3D6824103E0B16 CRC64;
     MDDLANLEFL SLVSKVTSEI QNHVGVSDKT LAEFVIDQHA KCKGVTDFKN QLEAMGAEFP
     QSLVESIDRL ILTLHPKYKN KGANGKESGA NGEDGGDATD RKTRVFKGLA IPDKDVDYEV
     ADEESEKDAP QVDALDDTFA MLEGLAGKAP SSKPKERSRK RSMSPYDSDD DMSRSKRHRR
     RDRSYSRSRS RSPRRGRQQN DELVFEDEFG RTRTVKPNNK QRSRKKYRDE DLDEFRRPPT
     PELDDEPVLY KVYDGKVTGV KDFGCFVNLQ GVKGKVDGLV HVTQMMEGRV NHPSDLVSRW
     QEVKVKVIKN ENNRISLSMK EVDQRTGQDL APGKRIASFG TGANSQGLGG IPGFDSAVPI
     VEDGFNSRKN GMRKRMTSPE RWEIKQLIAS GVIPKSDYPD IDEDFNAHIN GEGGFEEEED
     VDIEVREEEP PFLAGQTKQS LELSPIRVVK APDGSLNRAA MAGDTLAKER RDLKQQEAQE
     KAAKEAANVD LSSQWNDPMA QQRQFASDLR NTRTNEPSQA LPEWKKISTN SKETSFGKRT
     NMSIKEQRES LPVFKFRNQL LEAVATHQIL IVVGDTGSGK TTQMTQYLAE AGYGNELVIG
     CTQPRRVAAM SVAKRVAEEV GCALGNEVGY TIRFEDKTSP DTRIKYMTDG ILQREILLDP
     MLSKYSCIML DEAHERTIAT DVLFGLLKKT LKRRPDMKLI VTSATLDADK FSEYFYKCPI
     FSIPGRTFPV EVMYSKEPES DYLDAALVTV MQIHLTEPAG DILLFLTGKE EIDSSCEIIS
     ERMKALGPNV PELMILPIYG ALPSEVASRI FEPAPNGTRK VVIATNIAET SLTIDGIYYV
     VDPGFVKQSS YDGKLGMDRL QITPISQAQA RQRSGRAGRT GPGKCFRLYT EAAFQNEMLP
     TTIPEIQRQN LSNTILMLKA MGINDLLHFD FMDPPPTNTM LTALEELYQL GALDDEGLLT
     RLGRQMADFP MDPSLSKSLI KSVDLQCSDE ILTIVAMISA TQNVFHRPRD KQQQADQKKQ
     KFNDPSGDHI TLLNVYNGWK QGGFSTPWCH ENFVMPKNMQ RVRDVRNQLL QIMARHKHQV
     VSCGRNTIKV RQALCSGFFR NSARKDPAEG YKTLVEGTPV YLHPSSSLFG KPAEHVIYHS
     LVETTKEYMH FCSAIEPKWL VEAAPTFFKV APTDRLSKRK KAERIQPLHN KFAGEDDWRL
     SAQRRAGRGG GGTWG
//
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