ID A0A178AKS1_9PLEO Unreviewed; 331 AA.
AC A0A178AKS1;
DT 07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT 07-SEP-2016, sequence version 1.
DT 28-JUN-2023, entry version 24.
DE SubName: Full=Insert subdomain of RNA polymerase alpha subunit {ECO:0000313|EMBL:OAK98201.1};
GN ORFNames=IQ06DRAFT_29782 {ECO:0000313|EMBL:OAK98201.1};
OS Stagonospora sp. SRC1lsM3a.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Pleosporomycetidae; Pleosporales; Massarineae; Massarinaceae; Stagonospora.
OX NCBI_TaxID=765868 {ECO:0000313|EMBL:OAK98201.1, ECO:0000313|Proteomes:UP000077206};
RN [1] {ECO:0000313|EMBL:OAK98201.1, ECO:0000313|Proteomes:UP000077206}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SRC1lsM3a {ECO:0000313|EMBL:OAK98201.1,
RC ECO:0000313|Proteomes:UP000077206};
RG DOE Joint Genome Institute;
RA Zeiner C.A., Purvine S.O., Zink E.M., Wu S., Pasa-Tolic L., Chaput D.L.,
RA Haridas S., Grigoriev I.V., Santelli C.M., Hansel C.M.;
RT "Comparative analysis of secretome profiles of manganese(II)-oxidizing
RT ascomycete fungi.";
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the archaeal Rpo3/eukaryotic RPB3 RNA polymerase
CC subunit family. {ECO:0000256|ARBA:ARBA00025804}.
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DR EMBL; KV441716; OAK98201.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A178AKS1; -.
DR STRING; 765868.A0A178AKS1; -.
DR InParanoid; A0A178AKS1; -.
DR OrthoDB; 5472982at2759; -.
DR Proteomes; UP000077206; Unassembled WGS sequence.
DR GO; GO:0055029; C:nuclear DNA-directed RNA polymerase complex; IEA:UniProt.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd07031; RNAP_II_RPB3; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR HAMAP; MF_00320; RNApol_arch_Rpo3; 1.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR022842; RNAP_Rpo3/Rpb3/RPAC1.
DR InterPro; IPR036643; RNApol_insert_sf.
DR PANTHER; PTHR11800; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR11800:SF2; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Reference proteome {ECO:0000313|Proteomes:UP000077206};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 21..267
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
SQ SEQUENCE 331 AA; 35924 MW; 0DD72BE90BAED6CC CRC64;
MDYDPEGGAI NVRFLQADNQ RANFIVQNFN LETANSLRRV MLSEVPTLAI ETVEVLDNTS
VLADEFVCHR LGLVPLSSRG VEDVLYSRDC DCEMYCDNCS VTLVLNAKCT GNEIMKVFAR
DLVIESQRPN DQVGIPVITD SEGTGSCIVK LRRGQSIHMR CIAKKGIAKE HAKWAPSAAI
GFEYDPANKL HHLDYWYEED PEKEWPKDQE RINLDGGDRN PDEPFDYDAV PTRFFYDVET
VGGLDPDAIV TTGISTLQHK LASVIHALQG TSGDGMDLGG AQSPTMNGAG YGGVDAGYTT
PGYGGASQWG GAGAAQGGTT PYGATPYGQS W
//
