ID   A0A178IG50_9BACT        Unreviewed;       794 AA.
AC   A0A178IG50;
DT   07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT   07-SEP-2016, sequence version 1.
DT   27-MAR-2024, entry version 22.
DE   SubName: Full=Recombinase RecD {ECO:0000313|EMBL:OAM88992.1};
GN   ORFNames=AW736_09000 {ECO:0000313|EMBL:OAM88992.1};
OS   Opitutaceae bacterium TSB47.
OC   Bacteria; Verrucomicrobiota; Opitutae; Opitutales; Opitutaceae.
OX   NCBI_TaxID=1184151 {ECO:0000313|EMBL:OAM88992.1, ECO:0000313|Proteomes:UP000078486};
RN   [1] {ECO:0000313|EMBL:OAM88992.1, ECO:0000313|Proteomes:UP000078486}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TSB47 {ECO:0000313|EMBL:OAM88992.1,
RC   ECO:0000313|Proteomes:UP000078486};
RA   Wang Y., Shi Y., Qiu Z., Liu S., Yang H.;
RT   "High potential of lignocellulose degradation of a new Verrucomicrobia
RT   species.";
RL   Submitted (JAN-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OAM88992.1}.
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DR   EMBL; LRRQ01000112; OAM88992.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A178IG50; -.
DR   STRING; 1184151.AW736_09000; -.
DR   OrthoDB; 9803432at2; -.
DR   Proteomes; UP000078486; Unassembled WGS sequence.
DR   GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:InterPro.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd17933; DEXSc_RecD-like; 1.
DR   CDD; cd18809; SF1_C_RecD; 1.
DR   Gene3D; 1.10.10.2220; -; 1.
DR   Gene3D; 2.30.30.940; -; 1.
DR   Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   HAMAP; MF_01488; RecD_like; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR006345; DNA_helicase_RecD-like.
DR   InterPro; IPR003583; Hlx-hairpin-Hlx_DNA-bd_motif.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR029493; RecD-like_HHH.
DR   InterPro; IPR041451; RecD-like_SH13.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR027785; UvrD-like_helicase_C.
DR   PANTHER; PTHR43788; DNA2/NAM7 HELICASE FAMILY MEMBER; 1.
DR   PANTHER; PTHR43788:SF6; RECBCD ENZYME SUBUNIT RECD; 1.
DR   Pfam; PF13245; AAA_19; 1.
DR   Pfam; PF14490; HHH_4; 1.
DR   Pfam; PF14520; HHH_5; 1.
DR   Pfam; PF18335; SH3_13; 1.
DR   Pfam; PF13538; UvrD_C_2; 1.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM00278; HhH1; 3.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000078486}.
FT   DOMAIN          112..126
FT                   /note="Helix-hairpin-helix DNA-binding motif class 1"
FT                   /evidence="ECO:0000259|SMART:SM00278"
FT   DOMAIN          140..159
FT                   /note="Helix-hairpin-helix DNA-binding motif class 1"
FT                   /evidence="ECO:0000259|SMART:SM00278"
FT   DOMAIN          204..223
FT                   /note="Helix-hairpin-helix DNA-binding motif class 1"
FT                   /evidence="ECO:0000259|SMART:SM00278"
FT   DOMAIN          376..550
FT                   /note="AAA+ ATPase"
FT                   /evidence="ECO:0000259|SMART:SM00382"
FT   REGION          1..21
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   794 AA;  85368 MW;  B0314B1B8C74EFFE CRC64;
     MASSSPQPSS SRPAARATAP AAPDTLAGVL ERIIFLNEEN HYTIAEFRPD GAREKITIVG
     PLPGAQCGET LHLRGRWTRH AQHGDQFKVE SFTAELPSSV YGIRKYLGSG LVPGIGKVYA
     NKIVDAFGTD TLRVLSEESA RLRSVPGIGK VRAAAIKKAW DDQRALREIH IFLQTYGVTT
     SQCVKLINRY GAEAMQIIQR EPYRVARDID GIGFKTADRI AINLGFANDA PPRLDAGLLF
     AMETLQEEGH TAIREADLRD HAAALLETSP DLVTGRIAAL IEKKELVAHA ETGADAIPAS
     AASAGAAPAP LPGSALVQLP FLDRAEQKIA ATLARLLRVP GGLPAIKHEA AVQWAEQKAG
     LVFADRQRAA ITAALVSKIS ILTGGPGTGK TASLRALVDI LKAKRVRVHL AAPTGRAAQR
     LAESTGGFAS TIHRLLKYDP AKGGFSANEN TPLATDFLIV DEASMLDTRL ASALFQAIPS
     RAHLLLVGDT DQLPSVGAGN VLKDIIAVAT GDGDVTGDKY QVSGYRTPSA LPRSVRIPVT
     RLDVIHRQKG QSQIVTTAHA INNGDAALPP ATPELANIQA WGDLTFVIAD SPDDCLRKTI
     ALCTEFIPRH FHYFHPVRDV QILAPMHKGA AGVANLNQQL QAALNPHARA QRTLSGDYRP
     GDKVIQLRNN YDKNLFNGDI GTILAADAET GALTIDFDGE KHDFQRGETG DLALAYAISI
     HKSQGSEYPV VIIPLLKAHF MMLQRNLLYT AITRGKKKVF IVGEPAAYGM SVRNAESKHR
     TTHLREKITE ALAH
//