ID A0A179DMR5_9SPHI Unreviewed; 846 AA.
AC A0A179DMR5;
DT 07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT 07-SEP-2016, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=Clp protease ClpC {ECO:0000313|EMBL:OAQ42346.1};
GN ORFNames=A5893_04340 {ECO:0000313|EMBL:OAQ42346.1};
OS Pedobacter psychrophilus.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pedobacter.
OX NCBI_TaxID=1826909 {ECO:0000313|EMBL:OAQ42346.1, ECO:0000313|Proteomes:UP000078459};
RN [1] {ECO:0000313|EMBL:OAQ42346.1, ECO:0000313|Proteomes:UP000078459}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCM 8644 {ECO:0000313|EMBL:OAQ42346.1,
RC ECO:0000313|Proteomes:UP000078459};
RA Evans L.H., Alamgir A., Owens N., Weber N.D., Virtaneva K., Barbian K.,
RA Babar A., Rosenke K.;
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:OAQ42346.1, ECO:0000313|Proteomes:UP000078459}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCM 8644 {ECO:0000313|EMBL:OAQ42346.1,
RC ECO:0000313|Proteomes:UP000078459};
RA Svec P.;
RT "Pedobacter psychrophilus sp. nov., isolated from Antarctic fragmentary
RT rock.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAQ42346.1}.
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DR EMBL; LWHJ01000011; OAQ42346.1; -; Genomic_DNA.
DR RefSeq; WP_068821374.1; NZ_LWHJ01000011.1.
DR AlphaFoldDB; A0A179DMR5; -.
DR STRING; 1826909.A5893_04340; -.
DR OrthoDB; 9803641at2; -.
DR Proteomes; UP000078459; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 4.10.860.10; UVR domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001943; UVR_dom.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS50151; UVR; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Hydrolase {ECO:0000313|EMBL:OAQ42346.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protease {ECO:0000313|EMBL:OAQ42346.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000078459};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 1..146
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT DOMAIN 437..472
FT /note="UVR"
FT /evidence="ECO:0000259|PROSITE:PS50151"
FT COILED 456..483
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 846 AA; 94507 MW; E4F40412D1FC2ACF CRC64;
MEAKFSPRVK DVISYSREEA LRLGHDYIGT EHLLLGLIRE GDGMAIKILK SLSVDTAKLR
RAIEDAVRGN SGTTVNLGNI PLTKQAEKVL KITYLEAKIF KSDVIGTEHL LLSVLREEDN
IASQILAQFS LNYEAFKAEV ENNKDGFRDD IRNSAAGEED FKDDDAFTAP KKVSDIKSKT
PVLDNFGRDL TRMAEDGKLD PIVGREKEIE RVSQILSRRK KNNPILIGEP GVGKSAIAEG
LALRIVQRKV SRVLFSKRVV TLDLASLVAG TKYRGQFEER MKAVMNELEK SPDVILFIDE
IHTIVGAGGA SGSLDASNMF KPALARGEIQ CIGATTLDEY RQYIEKDGAL DRRFQKVMIE
PATPTETIEI LNRIKDKYED HHGVTYTDEA INACVSLTSR YITDRFLPDK AIDALDEAGS
RVHLTNIHVP ENIINIEEKI ELIKVEKNKV VKSQKYEEAA KLRDTEKNLL EELEKAKTEW
EADTKSKRYT VTEDNVAEVV SMMTGIPVQR VGQADSAKLL NMKEKINEKI IGQDDAIKKL
TRAIQRTRAG LKDPKKPIGS FIFLGPTGVG KTELAKELAR FMFDSDDSLI QIDMSEYMEK
FAISRLVGAP PGYVGYEEGG QLTEKVRRKP YSVILLDEIE KAHPDVFNIL LQVLDEGQLT
DSLGRKVDFR NTIVIMTSNI GARQLKDFGQ GVGFGTTAKA NQADTHSRTV IESALKKAFA
PEFLNRVDDV IVFNSLAKEE IFQIIDIELK ALFGRVSALG YEIKLTDEAK EYIADKGFDS
AFGARPLKRA IQKYLEDPIA EEILKGELSE GDVMEVGFDK EKQEIIIIGK VSKKKKKKEE
EKEGGE
//