ID A0A179DNR3_9SPHI Unreviewed; 173 AA.
AC A0A179DNR3;
DT 07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT 07-SEP-2016, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE RecName: Full=DUF421 domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=A5893_03340 {ECO:0000313|EMBL:OAQ42163.1};
OS Pedobacter psychrophilus.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pedobacter.
OX NCBI_TaxID=1826909 {ECO:0000313|EMBL:OAQ42163.1, ECO:0000313|Proteomes:UP000078459};
RN [1] {ECO:0000313|EMBL:OAQ42163.1, ECO:0000313|Proteomes:UP000078459}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCM 8644 {ECO:0000313|EMBL:OAQ42163.1,
RC ECO:0000313|Proteomes:UP000078459};
RA Evans L.H., Alamgir A., Owens N., Weber N.D., Virtaneva K., Barbian K.,
RA Babar A., Rosenke K.;
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:OAQ42163.1, ECO:0000313|Proteomes:UP000078459}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCM 8644 {ECO:0000313|EMBL:OAQ42163.1,
RC ECO:0000313|Proteomes:UP000078459};
RA Svec P.;
RT "Pedobacter psychrophilus sp. nov., isolated from Antarctic fragmentary
RT rock.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|ARBA:ARBA00004651};
CC Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the UPF0702 family.
CC {ECO:0000256|ARBA:ARBA00006448}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAQ42163.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; LWHJ01000011; OAQ42163.1; -; Genomic_DNA.
DR RefSeq; WP_068821193.1; NZ_LWHJ01000011.1.
DR AlphaFoldDB; A0A179DNR3; -.
DR OrthoDB; 9793799at2; -.
DR Proteomes; UP000078459; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 3.30.240.20; bsu07140 like domains; 1.
DR InterPro; IPR007353; DUF421.
DR InterPro; IPR023090; UPF0702_alpha/beta_dom_sf.
DR InterPro; IPR048454; YetF_N.
DR PANTHER; PTHR34582; UPF0702 TRANSMEMBRANE PROTEIN YCAP; 1.
DR PANTHER; PTHR34582:SF6; UPF0702 TRANSMEMBRANE PROTEIN YCAP; 1.
DR Pfam; PF04239; DUF421; 1.
DR Pfam; PF20730; YetF_N; 1.
PE 3: Inferred from homology;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000078459};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..32
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 44..61
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 67..87
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 17..86
FT /note="YetF-like N-terminal transmembrane"
FT /evidence="ECO:0000259|Pfam:PF20730"
FT DOMAIN 89..161
FT /note="YetF C-terminal"
FT /evidence="ECO:0000259|Pfam:PF04239"
SQ SEQUENCE 173 AA; 19477 MW; 7DB8B7659B018CB1 CRC64;
MKDWIEINGT TILGICVSVA IIYVVIIVLT RIFGKRSFSK MSSFDFAMTV AVGSIIATII
LSPKPSLLQG IVGLLMVYAL QLIAAYFRRF KFFEKLIDNS PLLLMDGEKI LEENLLKARV
TETDLRSKLR EANVIKLSQI KAVVFETTGD ISVLHHANDD EIDSWIMKDV LKR
//
