ID A0A182E8E9_ONCOC Unreviewed; 281 AA.
AC A0A182E8E9;
DT 07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT 07-SEP-2016, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=Probable RNA-binding protein EIF1AD {ECO:0000256|ARBA:ARBA00020989};
DE AltName: Full=Eukaryotic translation initiation factor 1A domain-containing protein {ECO:0000256|ARBA:ARBA00031998};
GN ORFNames=NOO_LOCUS4304 {ECO:0000313|EMBL:VDK72504.1};
OS Onchocerca ochengi (Filarial nematode worm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Onchocerca.
OX NCBI_TaxID=42157 {ECO:0000313|Proteomes:UP000077448, ECO:0000313|WBParaSite:nOo.2.0.1.t04304-RA};
RN [1] {ECO:0000313|Proteomes:UP000077448}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=22919073; DOI=10.1101/gr.138420.112;
RA Darby A.C., Armstrong S.D., Bah G.S., Kaur G., Hughes M.A., Kay S.M.,
RA Koldkaer P., Rainbow L., Radford A.D., Blaxter M.L., Tanya V.N.,
RA Trees A.J., Cordaux R., Wastling J.M., Makepeace B.L.;
RT "Analysis of gene expression from the Wolbachia genome of a filarial
RT nematode supports both metabolic and defensive roles within the
RT symbiosis.";
RL Genome Res. 22:2467-2477(2012).
RN [2] {ECO:0000313|WBParaSite:nOo.2.0.1.t04304-RA}
RP IDENTIFICATION.
RG WormBaseParasite;
RL Submitted (JUN-2016) to UniProtKB.
RN [3] {ECO:0000313|EMBL:VDK72504.1, ECO:0000313|Proteomes:UP000271087}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Laetsch R D., Stevens L., Kumar S., Blaxter L. M.;
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the EIF1AD family.
CC {ECO:0000256|ARBA:ARBA00007340}.
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DR EMBL; UYRW01000950; VDK72504.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A182E8E9; -.
DR STRING; 42157.A0A182E8E9; -.
DR WBParaSite; nOo.2.0.1.t04304-RA; nOo.2.0.1.t04304-RA; nOo.2.0.1.g04304.
DR Proteomes; UP000077448; Unassembled WGS sequence.
DR Proteomes; UP000271087; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:InterPro.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR039294; EIF1AD.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR006196; RNA-binding_domain_S1_IF1.
DR InterPro; IPR001253; TIF_eIF-1A.
DR PANTHER; PTHR21641:SF0; RNA-BINDING PROTEIN EIF1AD-RELATED; 1.
DR PANTHER; PTHR21641; TRANSLATION INITIATION FACTOR-RELATED; 1.
DR Pfam; PF01176; eIF-1a; 1.
DR SMART; SM00652; eIF1a; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000271087};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 36..57
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 101..162
FT /note="S1-like"
FT /evidence="ECO:0000259|Pfam:PF01176"
FT REGION 207..281
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 214..228
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 229..243
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 245..263
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 281 AA; 31972 MW; 3BE71E701D666551 CRC64;
MNGVKREKRE EEIRIIIICG YADTVVISEI SLAYQLFMLS LCLTIILAVT VLSCSSYRNC
TPSTSIQTLF LSSTVPVMSL TTKKRFVMKQ AESELFVPKE NEIIARVLRS PGRNLHEVDD
EKGEKYLVSM PRKFRETIYI KRGSFVFVIP IEEGVKVKAE ITQILDNENV LYLREQKIWP
KRFEVYAESI TREAKRGIVA GGAKRHDVID EDMLPSSDTN DDDECEEDSE KKNGDHSTGD
FSDLTESEEL GDDETEDSDG DGSNSDDFAF KIYNPNRLKR L
//