GenomeNet

Database: UniProt
Entry: A0A182E8E9_ONCOC
LinkDB: A0A182E8E9_ONCOC
Original site: A0A182E8E9_ONCOC 
ID   A0A182E8E9_ONCOC        Unreviewed;       281 AA.
AC   A0A182E8E9;
DT   07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT   07-SEP-2016, sequence version 1.
DT   24-JAN-2024, entry version 26.
DE   RecName: Full=Probable RNA-binding protein EIF1AD {ECO:0000256|ARBA:ARBA00020989};
DE   AltName: Full=Eukaryotic translation initiation factor 1A domain-containing protein {ECO:0000256|ARBA:ARBA00031998};
GN   ORFNames=NOO_LOCUS4304 {ECO:0000313|EMBL:VDK72504.1};
OS   Onchocerca ochengi (Filarial nematode worm).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Onchocerca.
OX   NCBI_TaxID=42157 {ECO:0000313|Proteomes:UP000077448, ECO:0000313|WBParaSite:nOo.2.0.1.t04304-RA};
RN   [1] {ECO:0000313|Proteomes:UP000077448}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=22919073; DOI=10.1101/gr.138420.112;
RA   Darby A.C., Armstrong S.D., Bah G.S., Kaur G., Hughes M.A., Kay S.M.,
RA   Koldkaer P., Rainbow L., Radford A.D., Blaxter M.L., Tanya V.N.,
RA   Trees A.J., Cordaux R., Wastling J.M., Makepeace B.L.;
RT   "Analysis of gene expression from the Wolbachia genome of a filarial
RT   nematode supports both metabolic and defensive roles within the
RT   symbiosis.";
RL   Genome Res. 22:2467-2477(2012).
RN   [2] {ECO:0000313|WBParaSite:nOo.2.0.1.t04304-RA}
RP   IDENTIFICATION.
RG   WormBaseParasite;
RL   Submitted (JUN-2016) to UniProtKB.
RN   [3] {ECO:0000313|EMBL:VDK72504.1, ECO:0000313|Proteomes:UP000271087}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Laetsch R D., Stevens L., Kumar S., Blaxter L. M.;
RL   Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the EIF1AD family.
CC       {ECO:0000256|ARBA:ARBA00007340}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; UYRW01000950; VDK72504.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A182E8E9; -.
DR   STRING; 42157.A0A182E8E9; -.
DR   WBParaSite; nOo.2.0.1.t04304-RA; nOo.2.0.1.t04304-RA; nOo.2.0.1.g04304.
DR   Proteomes; UP000077448; Unassembled WGS sequence.
DR   Proteomes; UP000271087; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0003743; F:translation initiation factor activity; IEA:InterPro.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   InterPro; IPR039294; EIF1AD.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR006196; RNA-binding_domain_S1_IF1.
DR   InterPro; IPR001253; TIF_eIF-1A.
DR   PANTHER; PTHR21641:SF0; RNA-BINDING PROTEIN EIF1AD-RELATED; 1.
DR   PANTHER; PTHR21641; TRANSLATION INITIATION FACTOR-RELATED; 1.
DR   Pfam; PF01176; eIF-1a; 1.
DR   SMART; SM00652; eIF1a; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000271087};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        36..57
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          101..162
FT                   /note="S1-like"
FT                   /evidence="ECO:0000259|Pfam:PF01176"
FT   REGION          207..281
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        214..228
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        229..243
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        245..263
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   281 AA;  31972 MW;  3BE71E701D666551 CRC64;
     MNGVKREKRE EEIRIIIICG YADTVVISEI SLAYQLFMLS LCLTIILAVT VLSCSSYRNC
     TPSTSIQTLF LSSTVPVMSL TTKKRFVMKQ AESELFVPKE NEIIARVLRS PGRNLHEVDD
     EKGEKYLVSM PRKFRETIYI KRGSFVFVIP IEEGVKVKAE ITQILDNENV LYLREQKIWP
     KRFEVYAESI TREAKRGIVA GGAKRHDVID EDMLPSSDTN DDDECEEDSE KKNGDHSTGD
     FSDLTESEEL GDDETEDSDG DGSNSDDFAF KIYNPNRLKR L
//
DBGET integrated database retrieval system