ID A0A194YS11_SORBI Unreviewed; 380 AA.
AC A0A194YS11;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE RecName: Full=THUMP domain-containing protein {ECO:0000259|Pfam:PF02926};
GN ORFNames=SORBI_3004G285200 {ECO:0000313|EMBL:KXG31024.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:KXG31024.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:KXG31024.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000763; KXG31024.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A194YS11; -.
DR STRING; 4558.A0A194YS11; -.
DR EnsemblPlants; KXG31024; KXG31024; SORBI_3004G285200.
DR Gramene; KXG31024; KXG31024; SORBI_3004G285200.
DR eggNOG; ENOG502QRCB; Eukaryota.
DR InParanoid; A0A194YS11; -.
DR OMA; QPIKFAV; -.
DR Proteomes; UP000000768; Chromosome 4.
DR ExpressionAtlas; A0A194YS11; baseline and differential.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0006400; P:tRNA modification; IBA:GO_Central.
DR InterPro; IPR004114; THUMP_dom.
DR InterPro; IPR040183; THUMPD1-like.
DR PANTHER; PTHR13452:SF13; OS02G0672400 PROTEIN; 1.
DR PANTHER; PTHR13452; THUMP DOMAIN CONTAINING PROTEIN 1-RELATED; 1.
DR Pfam; PF02926; THUMP; 1.
DR SUPFAM; SSF143437; THUMP domain-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 222..325
FT /note="THUMP"
FT /evidence="ECO:0000259|Pfam:PF02926"
FT REGION 1..55
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 144..171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 380 AA; 41058 MW; DE7AFB24A609845B CRC64;
MAAAPEPEAK LEDVTPSLSR EPLPESESDA PASTGREPLP ESESDAPASS QELKPWEQHA
AVINLPRYDY RASGSLLLRS HSGFLITCPI KREKSATKEA ISILEEYCHA NCCVSEHTEP
CDVENAVKKR KLCLEASGSL EEAVTNGNSN SVSESIGGTG NSSSPQSKMN DNVGRASNLS
LVKLSRSGLL FFKFPSGGLH VVEMLTEILH SLKSGKLKSP QWCHRIFPIQ ETCILSEEDL
HATVSKLFLD FSRSKTNKDK TIKFAVAYNR RGIDETEKNS NEGSNQQALM GREQCFKVVA
AAVKSVAENS VVDLRSPEVG VLVEMLPVSG VPLGSSVAGV SVLPAELIST KPRLCVRSLV
LDAKSNKKEV KSCGPSRQPE
//
