ID A0A195C2X4_9HYME Unreviewed; 601 AA.
AC A0A195C2X4;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=Transcription initiation factor TFIID subunit 5 {ECO:0000256|ARBA:ARBA00044130};
GN ORFNames=ALC62_14540 {ECO:0000313|EMBL:KYM94945.1};
OS Cyphomyrmex costatus.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Myrmicinae; Cyphomyrmex.
OX NCBI_TaxID=456900 {ECO:0000313|EMBL:KYM94945.1, ECO:0000313|Proteomes:UP000078542};
RN [1] {ECO:0000313|EMBL:KYM94945.1, ECO:0000313|Proteomes:UP000078542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MS0001 {ECO:0000313|EMBL:KYM94945.1};
RC TISSUE=Whole body {ECO:0000313|EMBL:KYM94945.1};
RA Nygaard S., Hu H., Boomsma J., Zhang G.;
RT "Cyphomyrmex costatus WGS genome.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the WD repeat TAF5 family.
CC {ECO:0000256|ARBA:ARBA00009435}.
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DR EMBL; KQ978344; KYM94945.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A195C2X4; -.
DR STRING; 456900.A0A195C2X4; -.
DR Proteomes; UP000078542; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR CDD; cd08044; TAF5_NTD2; 1.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 1.25.40.500; TFIID subunit TAF5, NTD2 domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR007582; TFIID_NTD2.
DR InterPro; IPR037264; TFIID_NTD2_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19879:SF1; CANNONBALL-RELATED; 1.
DR PANTHER; PTHR19879; TRANSCRIPTION INITIATION FACTOR TFIID; 1.
DR Pfam; PF04494; TFIID_NTD2; 1.
DR Pfam; PF00400; WD40; 4.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF160897; Taf5 N-terminal domain-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000078542};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT TRANSMEM 272..290
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 70..194
FT /note="TFIID subunit TAF5 NTD2"
FT /evidence="ECO:0000259|Pfam:PF04494"
FT REPEAT 361..402
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 403..437
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 445..486
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 519..551
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 601 AA; 68674 MW; C7A0F65CB9877608 CRC64;
MKRMKSDVIS ATIESYLKRR HYQTHDYRKG DQLFCQNSDQ TTLNATAECG TSQDNSIVFS
AITIDIIAAD QAYQRLKKWM SVALNEKLRI ELQGLLYPIF CHLYLEMLHA GSRQAAIQFL
KTYQNEFMSD TEKDFLEELS SVFSVQDIEL RPLVNAFRTR KYKVDLSESA HICLRQYLTK
YGHIILLQII NTHITIIRKA DSPQMDGEVL EERSQRYEAS INGHVEQPSG TGIDREMREL
QEAIRLIQHN SHQALRLFTV KNAIEKQVTD HYLFFFFFTL PVSYYIFIHY CSASCGLIAP
KMDKLAVGFS TAEIRLWAIG DTVLVKKNDK QCVPSTCDIS PFYKFNEQES TIRSEAGAIV
LRGHTDVVHD LRFIPEVDIL LSVSSDKDMR AWKLNNYSCT AIYSGHSYPI WCMDTSVFNL
YIATGSHDRT AKLWSLDRTF PLRIFAGHFL DVNCIKFHPN ARYLATGSAD KTVRLWSKDD
GNLLRVYVGA QSTIYTLAFS DDKSIFIWDL ATNGLLTELK GHKDTIMNVD WSLDNQYIAS
ASLDGIVRLW STQDFIKTLN GGSSSIMLQS EAPQIYSTYC SSILSLNYYK KSNSLICIGT
K
//
