ID A0A195FC47_9HYME Unreviewed; 1476 AA.
AC A0A195FC47;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=RNA polymerase-associated protein CTR9 like protein {ECO:0000313|EMBL:KYN37966.1};
GN ORFNames=ALC56_07590 {ECO:0000313|EMBL:KYN37966.1};
OS Trachymyrmex septentrionalis.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Myrmicinae; Trachymyrmex.
OX NCBI_TaxID=34720 {ECO:0000313|EMBL:KYN37966.1, ECO:0000313|Proteomes:UP000078541};
RN [1] {ECO:0000313|EMBL:KYN37966.1, ECO:0000313|Proteomes:UP000078541}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tsep2-gDNA-1 {ECO:0000313|EMBL:KYN37966.1};
RC TISSUE=Whole body {ECO:0000313|EMBL:KYN37966.1};
RA Nygaard S., Hu H., Boomsma J., Zhang G.;
RT "Trachymyrmex septentrionalis WGS genome.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the SLC35F solute transporter family.
CC {ECO:0000256|ARBA:ARBA00007863}.
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DR EMBL; KQ981685; KYN37966.1; -; Genomic_DNA.
DR STRING; 34720.A0A195FC47; -.
DR Proteomes; UP000078541; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0032991; C:protein-containing complex; IEA:UniProt.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR031101; Ctr9.
DR InterPro; IPR009262; SLC35_F1/F2/F6.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR14027; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9; 1.
DR PANTHER; PTHR14027:SF2; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 HOMOLOG; 1.
DR Pfam; PF06027; SLC35F; 1.
DR Pfam; PF13374; TPR_10; 1.
DR Pfam; PF14559; TPR_19; 2.
DR Pfam; PF13181; TPR_8; 3.
DR SMART; SM00028; TPR; 12.
DR SUPFAM; SSF103481; Multidrug resistance efflux transporter EmrE; 1.
DR SUPFAM; SSF48452; TPR-like; 4.
DR PROSITE; PS50005; TPR; 5.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000078541};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|ARBA:ARBA00022448}.
FT TRANSMEM 41..62
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 139..160
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 167..187
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 230..252
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 264..289
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 469..502
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 577..610
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 612..645
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 722..755
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 988..1021
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 1141..1228
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1323..1386
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1449..1476
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1101..1139
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 1149..1210
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1365..1379
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1459..1476
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1476 AA; 167236 MW; 51518381E11833BF CRC64;
MHHGMGGSAG DRHGAQNSAM QARNGVCDKI ENYISELGRW AVWRAIIMGQ FLSLVLCFMT
FINHYINTGS YKLSLPTGQN VPHYVMMCLV YTTWMSCRGV GNGLISVIRA RGWRYLLLAL
IDVEACTLIT SSHQYTSLAS IQLLDCVAIP VALVLSFLVL GVRYRMVHIV GVSVCLMGVG
CLVWAGIDDN NDPTATGKNQ LVGDMLCLGG AVLFSITTVL QELGVKTVDI IEYLGMIGFF
GTILSCMQTA VLQRFQIEAF HWDNIPVITI LVLYCITQFM FFSLVPVILF ESGATALQLA
LLTSDSFNIL AGMLNHHYKL EYYKLQKIDD FIKILESSRI DANIDYRDYE KDQMRALDML
AAYYVQEANK EKNKDKKRDL FTKATLLYTT ADKIIMYDQN HLLGRAYFCL LEGDKMEQAD
AQFNFVLNQS PNNIPSLLGK ACIAFNKKDY RGALAFYKKA LRTNPNCPAA VRLGMGHCFM
KLNNQEKARL AFERALQLDG QCVGALVGLS VLKLNQQQPD SIRTGVQMLS KAYTIDSTNP
MVLNHLANHF FFKKDYNKVQ HLALHAFHNT ENEAMRAESC YQLARAFHVQ GDYDQAFQYY
YQATQFAPPV FVLPHFGLGQ MYVYRGDAEN AAQCFEKVLK AQPGNYETMK ILGSLYANSS
SQSKRDIAKN HLRKVTEQFP DDVEAWIELA QILEQSDLNA ALNAYGTATR ILKEKVQADI
PPEILNNVGA LHYRLGNLEE ARKNLEESLA RSKADALHDS VYYNSIAVTT TYNLARLNEA
LCVFDRAEKL YKDILKEHPN YVDCYLRLGC MARDKGQIYE ASDWFKDALR INNEHPDAWS
LLGNLHLAKM EWGPGQKKFE RILKNPTTST DAYSLIALGN IWLQTLHQSG KDKEREKRHQ
DRALAMYKQV LRNDPKNIWA ANGIGAVLAH KGCVNEARDI FAQVREATAE FCDVWLNIAH
IYVEQKQFVS AIQMYENCLR KFYKYHHVEV LQYLGRAYFK AGKLKEAKLT LLKARRVAPQ
DTVLLYNIAL VLQRLATQIL KDEKSTLTTV LQAVHELGLS HKYFQYLSAH GDRMEQLAEA
EARRCQDLLS QAQYHVARAR RQAFKMRQTE EQRKLEEMRR QKEEEMLQKR QEYVEKTKNA
LVFGEMPSEK SSKKGKRLRT DQYVSDSGGS DRDEGREEIP KERKRKRKPS SETKDRKSKG
SDSDQPKQKR GKKNARTKKE KTRKGVVETL KGKLVKSKET ISTSESDSDT AAKAAMRINR
TAANESHPIP KALAPHARDL VRGRNPVAVQ EAVHVRVQFL VRDLHHDRAL DLDLLRDPGR
GAFQNQEVGR YPGQDQGQPK ADQDQGQVRA RAARGQGLTV AREEVDQSQD QDRVRKRAVL
GQGHQVVQEK AYRRQDPKVA RVQARRNASQ EARVDRGLNR NLFRGLNQDR EAVADRDRAL
DRRAVLEAGV RADRHGNSAS PVSRKSVSGS GGSDSE
//
