ID A0A195FDU0_9HYME Unreviewed; 1201 AA.
AC A0A195FDU0;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Helicase SKI2W {ECO:0000313|EMBL:KYN38573.1};
DE Flags: Fragment;
GN ORFNames=ALC56_07056 {ECO:0000313|EMBL:KYN38573.1};
OS Trachymyrmex septentrionalis.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Myrmicinae; Trachymyrmex.
OX NCBI_TaxID=34720 {ECO:0000313|EMBL:KYN38573.1, ECO:0000313|Proteomes:UP000078541};
RN [1] {ECO:0000313|EMBL:KYN38573.1, ECO:0000313|Proteomes:UP000078541}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tsep2-gDNA-1 {ECO:0000313|EMBL:KYN38573.1};
RC TISSUE=Whole body {ECO:0000313|EMBL:KYN38573.1};
RA Nygaard S., Hu H., Boomsma J., Zhang G.;
RT "Trachymyrmex septentrionalis WGS genome.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KQ981656; KYN38573.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A195FDU0; -.
DR STRING; 34720.A0A195FDU0; -.
DR Proteomes; UP000078541; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR025696; MTR4_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR InterPro; IPR040801; Ski2_N.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF8; HELICASE SKI2W; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR Pfam; PF17911; Ski2_N; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:KYN38573.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000078541};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 280..436
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 543..713
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KYN38573.1"
SQ SEQUENCE 1201 AA; 137421 MW; D71A0993AFF7CAF7 CRC64;
EPPPIWPDIR SELREYIECP ERLPIHQLDN TQCYWPRKAD VLSLLEFDLA PVNTTLKFDR
DPITGKIGEI QEIDLQGAGE TARNSMSMTR APGLLTDGVR GNPSNIPFWP GGFEEPKVPK
SEDMDNIDFE KDLRTLAKGF SSGLEFKSDN CTPINCMRYE VEASILEETE KLIINNDNIN
LMAVIHEEGN LLGSWSSVEE PKKESVQAVD NNIPFIDNSI LPKETNIPVL KISETQTDLT
KAEWAEQLDV SAPVTDFNKR IPDPAITFSY ELDTFQKQAI LKLEENSNVF VAAHTSAGKT
TVAEYAIALS QKHMTRVIYT SPIKALSNQK YRDFKRKFES VGLLTGDLQI NQTASCLIMT
TEILQSMLYC ASDVLRDLEF VIFDEVHYIN NEDRGHVWEE IVILLPQNIN IVMLSATVPN
PIIFADWVGR IKKRKMYVIS TLKRPIPLLH YLYTGTDGKT KDDKFLVLDS NSQFLLDGWY
KATNASDKKK DKTSKDCRRK IQMTPKQEEV LWRAFVSHLQ NNDMLPVVVF TLSRKRCDMN
AATFRNLDLT TAREKHQVHV FFQHNIKHLK GSDRELPQVL MMQELLEKGV GIHHSGILPI
LREIVEMLFQ SGVVKLLFAT ETFAMGVNMP ARTVVFDSIR KYDGNNFRTL FPTEYIQMAG
RAGRRGHDTT GTVIVMCRHD VPHFNDLKPM MCGEPQTLES KFKVTYSMLL NLRRVNESVT
VEAMMRKSFK ESPLASQEAS YNNELRKIER ELSNLPPLTE IQKKLSTFYH QAVDYLEDVK
FLNPYLLTSK KAAKSLIEGR VLLISYTDHY NKLALLLQVL YHKSSAQYKV LILKDANVST
SEITDFKSSQ IFEKWCEIIS LTKKEIFVPN INPSHEVLIL FPWHILKITN CQIKIDCSLV
LNDWEKRQIS RFKNDPPGQT CQTAVQELTS LSFNASTNAR ILQPYIEPSS KNDFQLRIQH
RNKLKASLND MKCMEIPNFE EQFRPVFERN HLEDKKRQLQ LKLSDEGMAL YPDYLNMVAL
LKHFRYIDND ERVALKGRVA LQMGSNELLI TELILKNVLT VLQPAEIAAL LSALIFQQRT
DVEPQLTPTL ANACKIMNEV HAELEHLEQY YQLSTLLPLN FGLVEVVYEW AQAKSFAEIM
KMTDVQEGII VRCIQQLGET LRDVKNAAVT IGDPILKEKM EEASTAIKRD IVFAASLYTQ
D
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