ID A0A196ME05_9SPHN Unreviewed; 682 AA.
AC A0A196ME05;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE SubName: Full=Conjugal transfer protein TraD {ECO:0000313|EMBL:OAN53524.1};
GN ORFNames=A7Q26_05770 {ECO:0000313|EMBL:OAN53524.1};
OS Sphingobium sp. TCM1.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=453246 {ECO:0000313|EMBL:OAN53524.1, ECO:0000313|Proteomes:UP000078322};
RN [1] {ECO:0000313|EMBL:OAN53524.1, ECO:0000313|Proteomes:UP000078322}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TCM1 {ECO:0000313|EMBL:OAN53524.1,
RC ECO:0000313|Proteomes:UP000078322};
RA Takahashi S.;
RT "Draft Genome Sequences of Sphingobium sp. strain TCM1 and Sphingomonas sp.
RT strain TDK1, Haloalkyl Organophosphorus Flame Retardant-Degrading
RT Bacteria.";
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAN53524.1}.
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DR EMBL; LXVX01000034; OAN53524.1; -; Genomic_DNA.
DR RefSeq; WP_066862576.1; NZ_LXVX01000034.1.
DR AlphaFoldDB; A0A196ME05; -.
DR STRING; 453246.A7Q26_05770; -.
DR OrthoDB; 102453at2; -.
DR Proteomes; UP000078322; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR019476; T4SS_TraD_DNA-bd.
DR PANTHER; PTHR37937; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR PANTHER; PTHR37937:SF1; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR Pfam; PF10412; TrwB_AAD_bind; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000078322};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 29..50
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 114..137
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 174..552
FT /note="Type IV secretion system coupling protein TraD DNA-
FT binding"
FT /evidence="ECO:0000259|Pfam:PF10412"
FT REGION 584..682
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 682 AA; 75314 MW; C7AEA73A2C83E1CB CRC64;
MSIFRHDTLG SWTRGGQAIV HNVRMTTQVF YQTFLAGLVI WIGGIIWYAL EKSSEYERFV
MLKITQAYFM GDTLPGNATP ILFKTPAGQQ YWTTPKGLIN SGVAHKTLAA FETYLLHGAM
LAGLFALAML GWAWFYFTRT GRGLGSNQFL RGARFGTVKQ VRRALWRYAK GSFDIGGVNV
PDAFEPEHIL ICGAPGTGKT NIIVKMLHGI RKRKRRAIVY DTAGTFVEKF YRPGIDVLLN
PLDARADCWS PWVDVPRDYH YDQIAESTIP DRTGDPFWAK AARGTLVAVL RKLAKQERTL
VSILLDTLLR SKLKDLAAFA AGTDAAAFIS TEGERTSAGI QAELASVMRS FSYLDDTADG
FSIRDWVANE RDDSWLFITV KADQLPSLRP LITVWLDIAI SAIMSMAPDR NRRLYCVIDE
LPTLQRLPSL GDFLARARKY GGCGILGFQS YPQLEATYGI QDAAAITGYC STWVALRAND
TPTAKHVSEN LGQVEQVEAN EGMSYGVNDM RDGVNLSRMQ VTRPLVMHTE VTNLPNLMGY
LRFGRSLPVV RFEDSYHKVA SLGEAFEERT TAPVRMTVPA GAVPVVPVAP SPPARPKPAP
SKRRRPARGG QDTELPLSQP EEPAIVPDST PDGSAVQPPP HPQGDHDQTM PTPPLELFGK
PAGFRLQQHG RHGGARNKAR PA
//
