ID A0A196MYM3_9SPHN Unreviewed; 658 AA.
AC A0A196MYM3;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Excinuclease ABC subunit B {ECO:0000313|EMBL:OAN60554.1};
GN ORFNames=A7X12_24385 {ECO:0000313|EMBL:OAN60554.1};
OS Sphingomonas sp. TDK1.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingomonas.
OX NCBI_TaxID=453247 {ECO:0000313|EMBL:OAN60554.1, ECO:0000313|Proteomes:UP000078445};
RN [1] {ECO:0000313|EMBL:OAN60554.1, ECO:0000313|Proteomes:UP000078445}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TDK1 {ECO:0000313|EMBL:OAN60554.1,
RC ECO:0000313|Proteomes:UP000078445};
RA Takahashi S.;
RT "Draft Genome Sequences of Sphingobium sp. strain TCM1 and Sphingomonas sp.
RT strain TDK1, Haloalkyl Organophosphorus Flame Retardant-Degrading
RT Bacteria.";
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAN60554.1}.
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DR EMBL; LXVY01000033; OAN60554.1; -; Genomic_DNA.
DR RefSeq; WP_017980845.1; NZ_LXVY01000033.1.
DR AlphaFoldDB; A0A196MYM3; -.
DR STRING; 453247.A7X12_24385; -.
DR GeneID; 67492804; -.
DR OrthoDB; 6730977at2; -.
DR Proteomes; UP000078445; Unassembled WGS sequence.
DR GO; GO:0009380; C:excinuclease repair complex; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR CDD; cd17916; DEXHc_UvrB; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR006935; Helicase/UvrB_N.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR004807; UvrB.
DR InterPro; IPR041471; UvrB_inter.
DR InterPro; IPR024759; UvrB_YAD/RRR_dom.
DR NCBIfam; TIGR00631; uvrb; 1.
DR PANTHER; PTHR24029; UVRABC SYSTEM PROTEIN B; 1.
DR PANTHER; PTHR24029:SF0; UVRABC SYSTEM PROTEIN B; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF04851; ResIII; 1.
DR Pfam; PF12344; UvrB; 1.
DR Pfam; PF17757; UvrB_inter; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA excision {ECO:0000256|ARBA:ARBA00022769};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Excision nuclease {ECO:0000256|ARBA:ARBA00022881}.
FT DOMAIN 27..184
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 432..585
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT COILED 251..285
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 658 AA; 73776 MW; 6E5B60E893CBD0BB CRC64;
MSTDVFILHS QYTPAGDQPE AIARLIAGVE EGAHHQTLKG ITGSGKTFTM ANIIHRLKRP
TLILAPNKTL TSQLYDEMRR FFPENAVEYF VSYYDYFQPE VYLPGRDEFI PKDSSINEHL
ERLRLSTTKS LIERRDTIVV ASVSSIYGMG DPDNYRALQV PLTEGARLGQ EELFRSLARL
QYDRAEHKLK RGTYRADGDA VEIYPADSEY KALRVGLANG VIASLQWFDA ATGKPMESAD
HYLVSPKTVL AATADQARKA ATAILEELET QVERLTSENR LTEAARLYDR ITNDAEMLRE
VGYCSGMENY ACYLSGRDPA LPPITLLDYL PKDGLLFVDE SHVMIPQISA MFRGDQARKD
TLIDYGFRLP SSKDSHPLSF HEFEQVKPQT IFVSATPGAY EVKASQGRVV EQIVRPTGLL
DPKVEVRPSQ GARDDLLREI AQRTQRDERV LVTTLTKVAT EELHAFLESE GIRARYMHSD
IKVEDRVAII EGLRVGEFDV LIGISLLREG LDIPEASLIA IFDADRAGFL RSAQALIQMI
GRVARNVNGT AVLYADMVTP AMRAAIDETE SRRQRQIAFN EENDVTPLSS VRGLASAQPY
GQEPSVHSEA FCENLYELCD RITEKEQALL AAVDHGQEDR AETIRGELDG LYRQFIYL
//
