ID   A0A197JQ11_9FUNG        Unreviewed;       551 AA.
AC   A0A197JQ11;
DT   05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2016, sequence version 1.
DT   27-MAR-2024, entry version 23.
DE   RecName: Full=RNA polymerase II-associated protein 3 {ECO:0000256|ARBA:ARBA00040133};
GN   ORFNames=K457DRAFT_22218 {ECO:0000313|EMBL:OAQ26556.1};
OS   Linnemannia elongata AG-77.
OC   Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota; Mortierellomycotina;
OC   Mortierellomycetes; Mortierellales; Mortierellaceae; Linnemannia.
OX   NCBI_TaxID=1314771 {ECO:0000313|EMBL:OAQ26556.1, ECO:0000313|Proteomes:UP000078512};
RN   [1] {ECO:0000313|EMBL:OAQ26556.1, ECO:0000313|Proteomes:UP000078512}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AG-77 {ECO:0000313|EMBL:OAQ26556.1,
RC   ECO:0000313|Proteomes:UP000078512};
RG   DOE Joint Genome Institute;
RA   Uehling J., Gryganskyi A., Hameed K., Tschaplinski T., Misztal P., Wu S.,
RA   Desiro A., Vande Pol N., Du Z.-Y., Zienkiewicz A., Zienkiewicz K.,
RA   Morin E., Tisserant E., Splivallo R., Hainaut M., Henrissat B., Ohm R.,
RA   Kuo A., Yan J., Lipzen A., Nolan M., Labutti K., Barry K., Goldstein A.,
RA   Labbe J., Schadt C., Tuskan G., Grigoriev I., Martin F., Vilgalys R.,
RA   Bonito G.;
RT   "Genome sequencing reveals origins of a unique bacterial endosymbiosis in
RT   the earliest lineages of terrestrial Fungi.";
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the RPAP3 family.
CC       {ECO:0000256|ARBA:ARBA00038275}.
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DR   EMBL; KV442066; OAQ26556.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A197JQ11; -.
DR   STRING; 1314771.A0A197JQ11; -.
DR   OrthoDB; 1353681at2759; -.
DR   Proteomes; UP000078512; Unassembled WGS sequence.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   InterPro; IPR025986; RPAP3-like_C.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR013105; TPR_2.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR46423; RNA POLYMERASE II-ASSOCIATED PROTEIN 3; 1.
DR   PANTHER; PTHR46423:SF1; RNA POLYMERASE II-ASSOCIATED PROTEIN 3; 1.
DR   Pfam; PF13877; RPAP3_C; 1.
DR   Pfam; PF07719; TPR_2; 1.
DR   SMART; SM00028; TPR; 3.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS50005; TPR; 2.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000078512};
KW   TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW   ProRule:PRU00339}.
FT   REPEAT          163..196
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          231..264
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   DOMAIN          422..513
FT                   /note="RNA-polymerase II-associated protein 3-like C-
FT                   terminal"
FT                   /evidence="ECO:0000259|Pfam:PF13877"
FT   REGION          58..90
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          112..164
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          274..327
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          383..422
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        62..88
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        121..136
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        274..326
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        383..404
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        405..422
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   551 AA;  60054 MW;  FC4E3A98CFBCBD4D CRC64;
     MDALTLQKLA QWEQAHASGN KKPLTAKEYP PMRSCQDITL KDIQPIQLTQ KKARIEAVSA
     QEKKASEQTT SPVTSTSPST TSEAIKSSGL SRKAYYESWD KFDVDKALED FERDDKRSSA
     KPSSISTNST KTAPKPLLSK PTGATAADQV EPATMPSDSV AAANAEKEKG NELFKKGLYV
     KAIEHYSASM ALDPSNSVLP INRAMALLKL ERFAEAERDC TLGLKLDSKN VKALWRRGIA
     RRSLGRVDEA KKDFETALTI DPVNKAVKEE LAKLKQGSTT TTPSSTAKPS ATKASATATT
     PSKPVAKSTT AKKQESPASE SSKPPVISSK RVLIKEVEND EDSELFSLGS TKRIAAEPKS
     TTPTASKVTP VEAAPKPVAV EVVKPTPSPT PAPTSAPVTP LTKPTTPPTT TSTSNPRTNM
     VAPSTTLDFQ RDWKSYSKNN ELLYQYIKLI QPEALPGIFK SSFESDYLSS MLTVFRTFYI
     PSEDPQLLYR SLVNLGKVQR FDMTLMFMTG TDKKDLVSIL QHLASHVNDS TTTYSQQDLA
     ALASKFKTTN Y
//