ID A0A199V010_ANACO Unreviewed; 806 AA.
AC A0A199V010;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Lysine-specific histone demethylase 1 {ECO:0000313|EMBL:OAY70407.1};
GN ORFNames=ACMD2_26003 {ECO:0000313|EMBL:OAY70407.1};
OS Ananas comosus (Pineapple) (Ananas ananas).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Bromeliaceae;
OC Bromelioideae; Ananas.
OX NCBI_TaxID=4615 {ECO:0000313|EMBL:OAY70407.1, ECO:0000313|Proteomes:UP000092600};
RN [1] {ECO:0000313|EMBL:OAY70407.1, ECO:0000313|Proteomes:UP000092600}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MD2 {ECO:0000313|Proteomes:UP000092600};
RC TISSUE=Leaf {ECO:0000313|EMBL:OAY70407.1};
RX PubMed=27374615; DOI=10.1093/dnares/dsw026;
RA Redwan R.M., Saidin A., Kumar S.V.;
RT "The draft genome of MD-2 pineapple using hybrid error correction of long
RT reads.";
RL DNA Res. 0:0-0(2016).
CC -!- SIMILARITY: Belongs to the flavin monoamine oxidase family.
CC {ECO:0000256|ARBA:ARBA00005995}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAY70407.1}.
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DR EMBL; LSRQ01003930; OAY70407.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A199V010; -.
DR STRING; 4615.A0A199V010; -.
DR Proteomes; UP000092600; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:EnsemblPlants.
DR GO; GO:0005634; C:nucleus; IEA:EnsemblPlants.
DR GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:UniProt.
DR GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IEA:EnsemblPlants.
DR GO; GO:1901564; P:organonitrogen compound metabolic process; IEA:UniProt.
DR GO; GO:0048364; P:root development; IEA:EnsemblPlants.
DR Gene3D; 3.90.660.10; -; 1.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR002937; Amino_oxidase.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR007526; SWIRM.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR10742; FLAVIN MONOAMINE OXIDASE; 1.
DR PANTHER; PTHR10742:SF381; LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 1; 1.
DR Pfam; PF01593; Amino_oxidase; 1.
DR Pfam; PF04433; SWIRM; 1.
DR SUPFAM; SSF54373; FAD-linked reductases, C-terminal domain; 1.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50934; SWIRM; 1.
PE 3: Inferred from homology;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Methyltransferase {ECO:0000313|EMBL:OAY70407.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000092600};
KW Transferase {ECO:0000313|EMBL:OAY70407.1}.
FT DOMAIN 111..212
FT /note="SWIRM"
FT /evidence="ECO:0000259|PROSITE:PS50934"
FT REGION 1..107
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 7..21
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 806 AA; 86341 MW; 028FF1C2D52BDB61 CRC64;
MEDPDSESTP PPAPIPSSSQ TTPPPGAAVA DDEAAAADGD PAPPSRKRRR RKKQFPGMVP
TAGLRVLRPH TARSAAPVAQ SEKALDEQLA APSSAPRRRG RPPSSSSLRL ARELDVEALI
AAAVGFPVDS LAEEEIEASV VPALGGAAQS NYIVVRNHIV ARWRSNPSAW VTESQALESI
RAEHRALVAA AYAFLLDHAY INFGLAPAVL SAPPRRAPSL PPPSVLVVGA GLAGLAAARH
LLSLGFKVAV LEGRRRPGGR VFTKRMASSA AEYPDVAAAA DLGGSVLTGI NGNPLGVLAR
QLGFPLHKVR DKCPLYLPDG RPVDPVVDSR IEAAFNELLD KVCRLRQAVA DELRSVDASL
GDALEAFRAA YGVAASREER MLLDWHLANL EYANAALLSD LSMAFWDQDD PYEMGGDHCF
IPGGNARFVR ALAQDVPVFY GRTVTRVRYA GDGVLLQAGR QLFRADMALC TVPLGVLKKG
RIHFSPPLPP RKQAAIQRLG FGLLNKVAIL FPYDFWDGSV DTFGHLTDDP SQRGEFFLFY
SYASVSGGPL LVALVAGESA IRFETTPPMD NVDKVLRVLR RIFSPKGIEI PKPLQAICTR
WGTDRFAYGS YSYVAVGSSG DDYDILAESA GDGRLFFAGE ATNRRYPATM HGALLSGFRE
AANIARAARR RATGPSVAEG TCVKDDVMDL DDLFRTPDLS FGAFTVLHDP SSPGPDSTSL
LRVGIGERKL GSGSLFLYGL ISRKHAEELA GADGDDRRLS MLYRNYGTKL AGRNGLGSPG
ESLIARIKAT RSDSSKSRTA NGTHNS
//
