ID A0A199VE10_ANACO Unreviewed; 720 AA.
AC A0A199VE10;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Poly(A)-specific ribonuclease PARN {ECO:0000313|EMBL:OAY75352.1};
GN ORFNames=ACMD2_20994 {ECO:0000313|EMBL:OAY75352.1};
OS Ananas comosus (Pineapple) (Ananas ananas).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Bromeliaceae;
OC Bromelioideae; Ananas.
OX NCBI_TaxID=4615 {ECO:0000313|EMBL:OAY75352.1, ECO:0000313|Proteomes:UP000092600};
RN [1] {ECO:0000313|EMBL:OAY75352.1, ECO:0000313|Proteomes:UP000092600}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MD2 {ECO:0000313|Proteomes:UP000092600};
RC TISSUE=Leaf {ECO:0000313|EMBL:OAY75352.1};
RX PubMed=27374615; DOI=10.1093/dnares/dsw026;
RA Redwan R.M., Saidin A., Kumar S.V.;
RT "The draft genome of MD-2 pineapple using hybrid error correction of long
RT reads.";
RL DNA Res. 0:0-0(2016).
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000256|ARBA:ARBA00001968};
CC -!- SIMILARITY: Belongs to the CAF1 family.
CC {ECO:0000256|ARBA:ARBA00008372}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAY75352.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; LSRQ01002118; OAY75352.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A199VE10; -.
DR STRING; 4615.A0A199VE10; -.
DR Proteomes; UP000092600; Unassembled WGS sequence.
DR GO; GO:0005739; C:mitochondrion; IEA:EnsemblPlants.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0009737; P:response to abscisic acid; IEA:EnsemblPlants.
DR GO; GO:0009751; P:response to salicylic acid; IEA:EnsemblPlants.
DR GO; GO:0009651; P:response to salt stress; IEA:EnsemblPlants.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR InterPro; IPR006941; RNase_CAF1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR15092; POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1; 1.
DR PANTHER; PTHR15092:SF22; POLY(A)-SPECIFIC RIBONUCLEASE PARN; 1.
DR Pfam; PF04857; CAF1; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000092600};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..24
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 25..720
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5008285831"
FT REGION 660..697
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 674..697
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 720 AA; 80071 MW; C3F080597309AAA3 CRC64;
MMMTTRRRSE WRLVWACSRT LTLTLTLGPS RPISSGEAGG SGGGAAVKKV TRWNFAEALE
GLRARVREAD FVAVDLEMTG VTTAPWRDAF EFDRPDVRYL KLRDSARSFA VVQLGVCPFR
FHAATSSFRA HPSGSRVHSC SASIHRILLC ICKIHRILKL PSIYSIWVIS GISYLSRAQE
IEALRKLRPQ YEDSSAAPSH TFEELGDIPI VSTADLLFTE RMKNRFTEWR EGILRSPSED
SSEESLKFST VQFQTVFFKM RPAIMLNGFS SHQLKLIQLI LRKHFKDLLY VRTVGEDGTW
QKRVVYTDSE EDKASLLKEV QEDATRSTVS RVRSAVGFRH VIDLLASEQK LIVGHNCLLD
IAHIYNKFIG PLPSSMAEFV LAVHDIFPYV VDTKHLLNSS QGIQYFMKKK SKSLSSAFSL
LCPAVSSPSK NFGTSSHVKV EVESDEAGSS CFSSGAKHEA GYDAFMTGCV FAQICCHLGV
NFELLSPSAN LTKIDRLAPY INLLYPAWNS GTVINLSTGT EKPEPGYKRN YPPVVFSKVT
LVWGFPSKLK PKDLKESICK VFGPDSVTSI FFIDSTAALI QLSKEEFVND FLLLKDTLER
KDDAISVLHP LSVLLEGGNT RAGNYDTYRD ICAASASKFL FADQADAVGT TCKRKLDFGS
RDSAGSSETT EVETISPDVK RLEGLKPDPK KQSSRPLSCE DILDSLYASK SLLGKRMRSA
//
