ID A0A199VU83_ANACO Unreviewed; 539 AA.
AC A0A199VU83;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=DDB1- and CUL4-associated factor 13 {ECO:0000256|ARBA:ARBA00021762};
DE AltName: Full=WD repeat and SOF domain-containing protein 1 {ECO:0000256|ARBA:ARBA00032239};
GN ORFNames=ACMD2_16406 {ECO:0000313|EMBL:OAY80604.1};
OS Ananas comosus (Pineapple) (Ananas ananas).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Bromeliaceae;
OC Bromelioideae; Ananas.
OX NCBI_TaxID=4615 {ECO:0000313|EMBL:OAY80604.1, ECO:0000313|Proteomes:UP000092600};
RN [1] {ECO:0000313|EMBL:OAY80604.1, ECO:0000313|Proteomes:UP000092600}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MD2 {ECO:0000313|Proteomes:UP000092600};
RC TISSUE=Leaf {ECO:0000313|EMBL:OAY80604.1};
RX PubMed=27374615; DOI=10.1093/dnares/dsw026;
RA Redwan R.M., Saidin A., Kumar S.V.;
RT "The draft genome of MD-2 pineapple using hybrid error correction of long
RT reads.";
RL DNA Res. 0:0-0(2016).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- SIMILARITY: Belongs to the WD repeat DCAF13/WDSOF1 family.
CC {ECO:0000256|ARBA:ARBA00005649}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAY80604.1}.
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DR EMBL; LSRQ01000835; OAY80604.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A199VU83; -.
DR STRING; 4615.A0A199VU83; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000092600; Unassembled WGS sequence.
DR GO; GO:0080008; C:Cul4-RING E3 ubiquitin ligase complex; IEA:EnsemblPlants.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR007287; Sof1.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22851:SF0; DDB1- AND CUL4-ASSOCIATED FACTOR 13; 1.
DR PANTHER; PTHR22851; U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN; 1.
DR Pfam; PF04158; Sof1; 1.
DR Pfam; PF00400; WD40; 4.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000092600};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 149..191
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 192..233
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 372..404
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 415..456
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 448..534
FT /note="Sof1-like protein"
FT /evidence="ECO:0000259|Pfam:PF04158"
SQ SEQUENCE 539 AA; 61379 MW; 0B9092E55008738B CRC64;
MGALIKTLKT QTVRSPNPAR PLPRAVSLSI STLLLRPHSA APRLPNPFLR HLRLRLRPSA
SASALLVASR IVQQSGRGAL EQDGETTMKV KVISRSTEEF TRERSQDLQK VYRNYDPILR
PLDKALEYTR AVNATKLDNI FARPFIGAMD GHMDSVSCMA KNPNHLKGIF SGSMDGDIRL
WDIAARKTVC QFSDHKGGVR GLAASTNGDI LVSCGTDCTV RLWKVPVLKM MDSSHSAGEV
LKPTERYVWK HAFWAVDHQW DGTLFATVGA QVDIWDHNRS VPVNSFEWGK DTVISVRFNP
GEPDVLATSA SDRSITLYDL RMSSPARKLI MKTKTNSICW NPMEPMNFTA ANEDCNCYSY
DVRKLDEAKV VHKDHVSAVM DIDYSPTGRE FVTGSYDRTI RIFKYNGDHS REIYHTKRMQ
RVFCVKYSCD ASYVISGSDD TNLRLWKARA SEQLGVLLPR ERRKHEYQDA LKERYKHLPE
VKRIMRHRHL PKPIYKAATL RRTMIDADKK KEQRKRAHSA PGSITVEPFR KRRIITEVE
//
