ID A0A1A5ZX85_9TREE Unreviewed; 1316 AA.
AC A0A1A5ZX85;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE RecName: Full=DNA damage-binding protein 1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=I303_07178 {ECO:0000313|EMBL:OBR82419.1};
OS Kwoniella dejecticola CBS 10117.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes;
OC Tremellales; Cryptococcaceae; Kwoniella.
OX NCBI_TaxID=1296121 {ECO:0000313|EMBL:OBR82419.1, ECO:0000313|Proteomes:UP000078595};
RN [1] {ECO:0000313|EMBL:OBR82419.1, ECO:0000313|Proteomes:UP000078595}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CBS 10117 {ECO:0000313|EMBL:OBR82419.1,
RC ECO:0000313|Proteomes:UP000078595};
RG The Broad Institute Genome Sequencing Platform;
RA Cuomo C., Litvintseva A., Chen Y., Heitman J., Sun S., Springer D.,
RA Dromer F., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A.,
RA Alvarado L., Berlin A.M., Chapman S.B., Dewar J., Goldberg J., Griggs A.,
RA Gujja S., Hansen M., Howarth C., Imamovic A., Larimer J., McCowan C.,
RA Murphy C., Pearson M., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Cryptococcus dejecticola CBS10117.";
RL Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the DDB1 family.
CC {ECO:0000256|ARBA:ARBA00007453}.
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DR EMBL; KI894035; OBR82419.1; -; Genomic_DNA.
DR RefSeq; XP_018260261.1; XM_018410452.1.
DR STRING; 1296121.A0A1A5ZX85; -.
DR GeneID; 28970877; -.
DR VEuPathDB; FungiDB:I303_07178; -.
DR OrthoDB; 226997at2759; -.
DR Proteomes; UP000078595; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 1.10.150.910; -; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 4.
DR InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR10644:SF3; DNA DAMAGE-BINDING PROTEIN 1; 1.
DR PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR Pfam; PF03178; CPSF_A; 1.
DR Pfam; PF10433; MMS1_N; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000078595}.
FT DOMAIN 123..708
FT /note="Cleavage/polyadenylation specificity factor A
FT subunit N-terminal"
FT /evidence="ECO:0000259|Pfam:PF10433"
FT DOMAIN 931..1264
FT /note="Cleavage/polyadenylation specificity factor A
FT subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF03178"
FT REGION 307..350
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 459..492
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 309..349
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 459..474
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1316 AA; 140762 MW; 2C0451CFE56AB3C7 CRC64;
MLYIASALTP TPIIGSLKVE GFTGPESTSL IIAKPDKVEV WNVEPKGLVY QAELELWGNI
VGIDKVEVEG ARPHFLVLTA PPSAHLLLIT YSASPTPALI VTSTIPLNPP TPTLRQAEFF
TSVVSQGNVA LVSLWIGVLS CIEMEVEKDK DARKRRASAA GMEVEEGKRL QFRDNFNINV
REHNLLHLSF LPVPPTSSGP LISFLWLSAP SDLQLQVRTL STAAHAFNDL SKIVDVVAPL
SNNISLTEET NFNHIPFSCP AARRVLPIPS ISSTRDGEYS LLVIGDEHSV LYNLGVVQQS
PKALRRLSIA SGPNTSPRAS ARRSPQTEMV NSVSKRRKSS MNSKATGGAD LTNERWELKP
VWRVRQGFGT ILAASILDSN SKGASAIIGD ECGRLTAIGW EFERNQGILE GATGQNGTVR
VKKVEMGVAS PPSSLTYLDS SHLFISSAAG DSSVVKLNLP EPNTAHSPIS PSSASDARAV
PRKGKGRARD DSEEGLWTVV LEDEGNEWRG DVDIKERWMN VAPVKDLCAV QEEGGGLSHL
VISSGASNTN SLRVVRSGVG LEEVSTIQGI EGVEKVWTLV DSSGSPRLLL STSSTTLLLQ
MEPEISLLDT TAQISDIPTL AAGILPGADI LVQITARGIA TWSDVTSGLS AGSIDLHKES
EIVAAQVYEN LAVIAKAGGE VNLFEITANG LNLVASLKAS AEIASISIIS SPSVPSPILA
IGTWSDEILV YSIAQIQAGS TAVTSLTESH YASSLHLQES VSSLTSTSGV QLLAGLSDGS
LVVYDLEPSG PNGEVNSKSR KVTSLGNRPL NIEPTTGPTV SGDKVIGVGL TERMSVIFES
GERIDTSSVS RKDVICATSL NSPTHGEILV LVSSDELSFV KINSLKKLSI STLDLGDRSA
TKIIAYNEHL LVDGVVVKTM DAQNGEVLQM SSLELRDSVT LNPLAEMQLK EREEVTSLRS
LMLNGKQYLA VGTAILPTDE EDGGADLEED NHTNVKEGRL LLIDIVNNTS KTKHELKVVV
EKVIEGPVYD LEVIHGFLAV AAGSKVTINR LSPSPQLNLV ETSSFTSAFL ASHLTVTPAT
TSTTGSNLTA EDRLVLGDGL RSIIVLSVDE GDGKIYDDTR DLATHAVNAM GPVTDDGEGV
IIGDGYNNIM TFRLKDRIEP AATFGLHEEI IRFVPGSLAP PGSSSDVLRP DQLYMTATGR
LGIIGELTKS ATRTLDDLQR NLDKYWRSPL GGGVGWKEFR KGGSELVRRD MAGWVDGDFV
QKFLNTSLFT PEETDKVLNG STTHEQVHKI DSASGKKEKA DRADVVRVLE AAGGMH
//